Gene annotation
Transcriptome id Sobic.007G129900.1
Synonym Sb07g020570
Functional annotation expressed protein
UniProt A0A1B6PHK9
Pfam -
Panther DB PTHR11439 PTHR11439:SF161
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00980 : zinc knuckle (CCHC-type) family protein
RAP-DB (Rice) LOC_Os08g32560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G432600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
2 Sobic.003G008100 U-box domain containing protein, expressed -
3 Sobic.010G228200 expressed protein -
4 Sobic.007G120600 KED, putative, expressed -
5 Sobic.004G052700 hypothetical protein -
6 Sobic.008G096401 - -
7 Sobic.010G146350 - -
8 Sobic.001G060001 - -
9 Sobic.005G207600 - -
10 Sobic.005G186600 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed -
11 Sobic.004G181100 expressed protein -
12 Sobic.002G227800 gibberellin receptor, putative, expressed -
13 Sobic.010G267651 - -
14 Sobic.002G188800 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
15 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
16 Sobic.006G042800 expressed protein -
17 Sobic.005G207550 - -
18 Sobic.002G159400 expressed protein -
19 Sobic.003G021401 - -
20 Sobic.006G088500 OsFBX135 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G129900 Sobic007G129900 Sobic003G432600 Sobic003G432600 Sobic007G129900--Sobic003G432600 Sobic003G008100 Sobic003G008100 Sobic007G129900--Sobic003G008100 Sobic010G228200 Sobic010G228200 Sobic007G129900--Sobic010G228200 Sobic007G120600 Sobic007G120600 Sobic007G129900--Sobic007G120600 Sobic004G052700 Sobic004G052700 Sobic007G129900--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic007G129900--Sobic008G096401 Sobic010G146350 Sobic010G146350 Sobic007G129900--Sobic010G146350 Sobic001G060001 Sobic001G060001 Sobic007G129900--Sobic001G060001 Sobic005G207600 Sobic005G207600 Sobic007G129900--Sobic005G207600 Sobic003G432600--Sobic005G207600 Sobic003G432600--Sobic010G146350 Sobic003G432600--Sobic010G228200 Sobic003G021401 Sobic003G021401 Sobic003G432600--Sobic003G021401 Sobic005G207550 Sobic005G207550 Sobic003G432600--Sobic005G207550 Sobic001G190600 Sobic001G190600 Sobic003G432600--Sobic001G190600 Sobic003G432600--Sobic007G120600 Sobic003G432600--Sobic001G060001 Sobic006G137900 Sobic006G137900 Sobic003G432600--Sobic006G137900 Sobic002G277900 Sobic002G277900 Sobic003G008100--Sobic002G277900 Sobic010G266000 Sobic010G266000 Sobic003G008100--Sobic010G266000 Sobic001G033701 Sobic001G033701 Sobic003G008100--Sobic001G033701 Sobic004G184900 Sobic004G184900 Sobic003G008100--Sobic004G184900 Sobic004G122700 Sobic004G122700 Sobic003G008100--Sobic004G122700 Sobic010G103300 Sobic010G103300 Sobic003G008100--Sobic010G103300 Sobic008G008701 Sobic008G008701 Sobic003G008100--Sobic008G008701 Sobic004G090900 Sobic004G090900 Sobic003G008100--Sobic004G090900 Sobic002G046500 Sobic002G046500 Sobic003G008100--Sobic002G046500 Sobic010G228200--Sobic010G146350 Sobic010G228200--Sobic005G207600 Sobic010G228200--Sobic001G190600 Sobic010G228200--Sobic005G207550 Sobic010G228200--Sobic007G120600 Sobic010G228200--Sobic001G060001 Sobic010G228200--Sobic006G137900 Sobic001G138500 Sobic001G138500 Sobic010G228200--Sobic001G138500 Sobic010G228200--Sobic004G052700 Sobic007G120600--Sobic004G052700 Sobic007G120600--Sobic008G096401 Sobic007G120600--Sobic001G060001 Sobic007G120600--Sobic010G146350 Sobic007G120600--Sobic005G207600 Sobic010G267651 Sobic010G267651 Sobic007G120600--Sobic010G267651 Sobic004G181100 Sobic004G181100 Sobic007G120600--Sobic004G181100 Sobic007G120600--Sobic010G228200 Sobic002G188800 Sobic002G188800 Sobic007G120600--Sobic002G188800 Sobic004G052700--Sobic008G096401 Sobic004G052700--Sobic007G120600 Sobic004G052700--Sobic001G060001 Sobic004G052700--Sobic004G181100 Sobic006G042800 Sobic006G042800 Sobic004G052700--Sobic006G042800 Sobic004G052700--Sobic010G267651 Sobic004G052700--Sobic002G188800 Sobic004G052700--Sobic010G146350 Sobic002G159400 Sobic002G159400 Sobic004G052700--Sobic002G159400 Sobic008G096401--Sobic004G052700 Sobic008G096401--Sobic007G120600 Sobic008G096401--Sobic001G060001 Sobic008G096401--Sobic004G181100 Sobic008G096401--Sobic006G042800 Sobic008G096401--Sobic010G267651 Sobic008G096401--Sobic002G188800 Sobic008G096401--Sobic010G146350 Sobic008G096401--Sobic002G159400 Sobic010G146350--Sobic005G207600 Sobic010G146350--Sobic010G228200 Sobic010G146350--Sobic007G120600 Sobic010G146350--Sobic001G060001 Sobic010G146350--Sobic001G190600 Sobic010G146350--Sobic005G207550 Sobic010G146350--Sobic004G052700 Sobic010G146350--Sobic008G096401 Sobic010G146350--Sobic006G137900 Sobic001G060001--Sobic007G120600 Sobic001G060001--Sobic004G052700 Sobic001G060001--Sobic008G096401 Sobic001G060001--Sobic010G146350 Sobic001G060001--Sobic005G207600 Sobic001G060001--Sobic010G228200 Sobic001G060001--Sobic004G181100 Sobic001G060001--Sobic010G267651 Sobic001G060001--Sobic006G042800 Sobic005G207600--Sobic010G146350 Sobic005G207600--Sobic010G228200 Sobic005G207600--Sobic001G190600 Sobic005G207600--Sobic005G207550 Sobic005G207600--Sobic001G060001 Sobic005G207600--Sobic007G120600 Sobic005G207600--Sobic006G137900 Sobic005G207600--Sobic001G138500 Sobic005G207600--Sobic004G052700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.