Gene annotation
Transcriptome id Sobic.002G227800.1
Synonym Sb02g026800, CXE12, ATCXE12
Functional annotation gibberellin receptor, putative, expressed
UniProt A0A1W0W5H8
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF151
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48700 : carboxyesterase 13
RAP-DB (Rice) LOC_Os09g28650.1 : gibberellin receptor, putative, expressed
MaizeGDB (Corn) Zm00025a031688 , Zm00025a020760 , Zm00025a047285
Brachypodium -
Barley HORVU5Hr1G068960.2 , HORVU5Hr1G068960.1 , HORVU2Hr1G067270.2
Wheat TraesCS5B02G240600 , TraesCS5A02G241900 , TraesCS5D02G248100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G146350 - -
2 Sobic.005G207600 - -
3 Sobic.007G120600 KED, putative, expressed -
4 Sobic.010G228200 expressed protein -
5 Sobic.001G060001 - -
6 Sobic.004G052700 hypothetical protein -
7 Sobic.008G096401 - -
8 Sobic.003G023100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
9 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
10 Sobic.006G088500 OsFBX135 - F-box domain containing protein, expressed -
11 Sobic.003G120050 - -
12 Sobic.003G021401 - -
13 Sobic.005G207550 - -
14 Sobic.004G327100 atATG18b, putative, expressed K17908: WIPI1_2, autophagy-related protein 18
15 Sobic.006G137900 heavy metal-associated domain containing protein, expressed -
16 Sobic.010G267651 - -
17 Sobic.004G013400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
18 Sobic.002G063201 - -
19 Sobic.001G138500 expressed protein -
20 Sobic.001G452300 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G227800 Sobic002G227800 Sobic010G146350 Sobic010G146350 Sobic002G227800--Sobic010G146350 Sobic005G207600 Sobic005G207600 Sobic002G227800--Sobic005G207600 Sobic007G120600 Sobic007G120600 Sobic002G227800--Sobic007G120600 Sobic010G228200 Sobic010G228200 Sobic002G227800--Sobic010G228200 Sobic001G060001 Sobic001G060001 Sobic002G227800--Sobic001G060001 Sobic004G052700 Sobic004G052700 Sobic002G227800--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic002G227800--Sobic008G096401 Sobic003G023100 Sobic003G023100 Sobic002G227800--Sobic003G023100 Sobic001G190600 Sobic001G190600 Sobic002G227800--Sobic001G190600 Sobic010G146350--Sobic005G207600 Sobic010G146350--Sobic010G228200 Sobic010G146350--Sobic007G120600 Sobic010G146350--Sobic001G060001 Sobic010G146350--Sobic001G190600 Sobic005G207550 Sobic005G207550 Sobic010G146350--Sobic005G207550 Sobic010G146350--Sobic004G052700 Sobic010G146350--Sobic008G096401 Sobic006G137900 Sobic006G137900 Sobic010G146350--Sobic006G137900 Sobic005G207600--Sobic010G146350 Sobic005G207600--Sobic010G228200 Sobic005G207600--Sobic001G190600 Sobic005G207600--Sobic005G207550 Sobic005G207600--Sobic001G060001 Sobic005G207600--Sobic007G120600 Sobic005G207600--Sobic006G137900 Sobic001G138500 Sobic001G138500 Sobic005G207600--Sobic001G138500 Sobic005G207600--Sobic004G052700 Sobic007G120600--Sobic004G052700 Sobic007G120600--Sobic008G096401 Sobic007G120600--Sobic001G060001 Sobic007G120600--Sobic010G146350 Sobic007G120600--Sobic005G207600 Sobic010G267651 Sobic010G267651 Sobic007G120600--Sobic010G267651 Sobic004G181100 Sobic004G181100 Sobic007G120600--Sobic004G181100 Sobic007G120600--Sobic010G228200 Sobic002G188800 Sobic002G188800 Sobic007G120600--Sobic002G188800 Sobic010G228200--Sobic010G146350 Sobic010G228200--Sobic005G207600 Sobic010G228200--Sobic001G190600 Sobic010G228200--Sobic005G207550 Sobic010G228200--Sobic007G120600 Sobic010G228200--Sobic001G060001 Sobic010G228200--Sobic006G137900 Sobic010G228200--Sobic001G138500 Sobic010G228200--Sobic004G052700 Sobic001G060001--Sobic007G120600 Sobic001G060001--Sobic004G052700 Sobic001G060001--Sobic008G096401 Sobic001G060001--Sobic010G146350 Sobic001G060001--Sobic005G207600 Sobic001G060001--Sobic010G228200 Sobic001G060001--Sobic004G181100 Sobic001G060001--Sobic010G267651 Sobic006G042800 Sobic006G042800 Sobic001G060001--Sobic006G042800 Sobic004G052700--Sobic008G096401 Sobic004G052700--Sobic007G120600 Sobic004G052700--Sobic001G060001 Sobic004G052700--Sobic004G181100 Sobic004G052700--Sobic006G042800 Sobic004G052700--Sobic010G267651 Sobic004G052700--Sobic002G188800 Sobic004G052700--Sobic010G146350 Sobic002G159400 Sobic002G159400 Sobic004G052700--Sobic002G159400 Sobic008G096401--Sobic004G052700 Sobic008G096401--Sobic007G120600 Sobic008G096401--Sobic001G060001 Sobic008G096401--Sobic004G181100 Sobic008G096401--Sobic006G042800 Sobic008G096401--Sobic010G267651 Sobic008G096401--Sobic002G188800 Sobic008G096401--Sobic010G146350 Sobic008G096401--Sobic002G159400 Sobic003G120050 Sobic003G120050 Sobic003G023100--Sobic003G120050 Sobic003G021401 Sobic003G021401 Sobic003G023100--Sobic003G021401 Sobic004G200501 Sobic004G200501 Sobic003G023100--Sobic004G200501 Sobic003G023100--Sobic010G146350 Sobic003G023100--Sobic005G207600 Sobic002G277366 Sobic002G277366 Sobic003G023100--Sobic002G277366 Sobic003G023100--Sobic010G228200 Sobic003G023100--Sobic006G137900 Sobic003G023100--Sobic007G120600 Sobic001G190600--Sobic005G207550 Sobic001G190600--Sobic001G138500 Sobic004G122700 Sobic004G122700 Sobic001G190600--Sobic004G122700 Sobic001G190600--Sobic006G137900 Sobic008G008701 Sobic008G008701 Sobic001G190600--Sobic008G008701 Sobic001G190600--Sobic005G207600 Sobic001G190600--Sobic010G146350 Sobic004G013400 Sobic004G013400 Sobic001G190600--Sobic004G013400 Sobic001G190600--Sobic010G228200
Octagon: transcription factors


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