Gene annotation
Transcriptome id Sobic.004G327100.2,Sobic.004G327100.1
Synonym G18B, Sb04g035650, ATATG18B, ATG18B
Functional annotation atATG18b, putative, expressed
UniProt C5XV56 , A0A194YSU3
Pfam -
Panther DB PTHR11227 PTHR11227:SF17
NCBI CDD KOG2110; Uncharacterized conserved protein, contains WD40 repeats KOG2111Uncharacterized conserved protein, contains WD40 repeats
KEGG Orthology K17908; WIPI1_2, autophagy-related protein 18
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30510 : homolog of yeast autophagy 18 (ATG18) B
RAP-DB (Rice) LOC_Os02g54910.1 : atATG18b, putative, expressed
MaizeGDB (Corn) Zm00025a022438
Brachypodium KQK01040 , KQK01098 , KQK01097 , KQK01096
Barley HORVU6Hr1G084430.20 , HORVU6Hr1G084430.21 , HORVU6Hr1G084430.22 , HORVU6Hr1G084430.23 , HORVU6Hr1G084430.24 , HORVU6Hr1G084430.25 , HORVU6Hr1G084430.26 , HORVU6Hr1G084430.27 , HORVU6Hr1G084430.15 , HORVU6Hr1G084430.14 , HORVU6Hr1G084430.16 , HORVU6Hr1G084430.11 , HORVU6Hr1G084430.10 , HORVU6Hr1G084430.13 , HORVU6Hr1G084430.12 , HORVU6Hr1G084430.19 , HORVU6Hr1G084430.18 , HORVU6Hr1G084430.1 , HORVU6Hr1G084430.3 , HORVU6Hr1G084430.2 , HORVU6Hr1G084430.5 , HORVU6Hr1G084430.4 , HORVU6Hr1G084430.7 , HORVU6Hr1G084430.6 , HORVU6Hr1G084430.9 , HORVU6Hr1G084430.8
Wheat TraesCS6A02G353600 , TraesCS6B02G386200 , TraesCS6D02G335900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G122700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.005G207550 - -
3 Sobic.006G137900 heavy metal-associated domain containing protein, expressed -
4 Sobic.008G008701 - -
5 Sobic.001G138500 expressed protein -
6 Sobic.008G008601 - -
7 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
8 Sobic.001G452300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.004G090900 nuclear ribonuclease Z, putative, expressed K00784: ribonuclease Z
10 Sobic.001G045300 ubiquitin family protein, putative, expressed -
11 Sobic.002G046500 gibberellin 20 oxidase 1-B, putative, expressed -
12 Sobic.007G027400 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
13 Sobic.005G013700 - -
14 Sobic.001G033701 - -
15 Sobic.005G014600 OsMan09 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
16 Sobic.007G100900 - -
17 Sobic.002G063500 Leucine Rich Repeat family protein, expressed -
18 Sobic.008G069901 - -
19 Sobic.005G025500 expressed protein -
20 Sobic.002G084100 - -


Gene co-expression network
sample Sobic004G327100 Sobic004G327100 Sobic004G122700 Sobic004G122700 Sobic004G327100--Sobic004G122700 Sobic005G207550 Sobic005G207550 Sobic004G327100--Sobic005G207550 Sobic006G137900 Sobic006G137900 Sobic004G327100--Sobic006G137900 Sobic008G008701 Sobic008G008701 Sobic004G327100--Sobic008G008701 Sobic001G138500 Sobic001G138500 Sobic004G327100--Sobic001G138500 Sobic008G008601 Sobic008G008601 Sobic004G327100--Sobic008G008601 Sobic001G190600 Sobic001G190600 Sobic004G327100--Sobic001G190600 Sobic001G452300 Sobic001G452300 Sobic004G327100--Sobic001G452300 Sobic004G090900 Sobic004G090900 Sobic004G327100--Sobic004G090900 Sobic004G122700--Sobic008G008701 Sobic004G122700--Sobic004G090900 Sobic004G122700--Sobic001G138500 Sobic004G122700--Sobic008G008601 Sobic001G045300 Sobic001G045300 Sobic004G122700--Sobic001G045300 Sobic004G122700--Sobic005G207550 Sobic002G046500 Sobic002G046500 Sobic004G122700--Sobic002G046500 Sobic001G033701 Sobic001G033701 Sobic004G122700--Sobic001G033701 Sobic007G027400 Sobic007G027400 Sobic004G122700--Sobic007G027400 Sobic005G207550--Sobic001G138500 Sobic005G207550--Sobic001G190600 Sobic005G207550--Sobic008G008701 Sobic005G207550--Sobic004G122700 Sobic005G207550--Sobic006G137900 Sobic005G207550--Sobic001G045300 Sobic005G207550--Sobic004G090900 Sobic005G207550--Sobic007G027400 Sobic005G207600 Sobic005G207600 Sobic005G207550--Sobic005G207600 Sobic006G137900--Sobic005G207550 Sobic006G137900--Sobic004G122700 Sobic006G137900--Sobic001G138500 Sobic006G137900--Sobic001G190600 Sobic006G137900--Sobic008G008701 Sobic006G137900--Sobic008G008601 Sobic005G013700 Sobic005G013700 Sobic006G137900--Sobic005G013700 Sobic004G325150 Sobic004G325150 Sobic006G137900--Sobic004G325150 Sobic006G137900--Sobic004G090900 Sobic008G008701--Sobic004G122700 Sobic008G008701--Sobic004G090900 Sobic008G008701--Sobic001G045300 Sobic008G008701--Sobic001G138500 Sobic008G008701--Sobic002G046500 Sobic008G008701--Sobic007G027400 Sobic008G008701--Sobic005G207550 Sobic008G008701--Sobic001G033701 Sobic008G008701--Sobic008G008601 Sobic001G138500--Sobic005G207550 Sobic001G138500--Sobic008G008701 Sobic001G138500--Sobic004G122700 Sobic001G138500--Sobic001G190600 Sobic001G138500--Sobic006G137900 Sobic001G138500--Sobic004G090900 Sobic001G138500--Sobic001G045300 Sobic001G138500--Sobic007G027400 Sobic001G138500--Sobic002G046500 Sobic008G008601--Sobic001G452300 Sobic008G008601--Sobic004G122700 Sobic008G008601--Sobic008G008701 Sobic002G063500 Sobic002G063500 Sobic008G008601--Sobic002G063500 Sobic008G008601--Sobic004G090900 Sobic008G069901 Sobic008G069901 Sobic008G008601--Sobic008G069901 Sobic007G087500 Sobic007G087500 Sobic008G008601--Sobic007G087500 Sobic008G008601--Sobic001G033701 Sobic004G184900 Sobic004G184900 Sobic008G008601--Sobic004G184900 Sobic001G190600--Sobic005G207550 Sobic001G190600--Sobic001G138500 Sobic001G190600--Sobic004G122700 Sobic001G190600--Sobic006G137900 Sobic001G190600--Sobic008G008701 Sobic001G190600--Sobic005G207600 Sobic010G146350 Sobic010G146350 Sobic001G190600--Sobic010G146350 Sobic004G013400 Sobic004G013400 Sobic001G190600--Sobic004G013400 Sobic010G228200 Sobic010G228200 Sobic001G190600--Sobic010G228200 Sobic001G452300--Sobic008G008601 Sobic001G452300--Sobic007G087500 Sobic001G452300--Sobic004G122700 Sobic001G452300--Sobic008G069901 Sobic001G452300--Sobic002G063500 Sobic001G452300--Sobic004G184900 Sobic001G452300--Sobic008G008701 Sobic001G452300--Sobic004G090900 Sobic001G452300--Sobic001G033701 Sobic004G090900--Sobic002G046500 Sobic004G090900--Sobic001G045300 Sobic004G090900--Sobic007G027400 Sobic004G090900--Sobic008G008701 Sobic002G084100 Sobic002G084100 Sobic004G090900--Sobic002G084100 Sobic005G014600 Sobic005G014600 Sobic004G090900--Sobic005G014600 Sobic004G090900--Sobic004G122700 Sobic004G090900--Sobic001G033701 Sobic003G245101 Sobic003G245101 Sobic004G090900--Sobic003G245101
Octagon: transcription factors


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