Gene annotation
Transcriptome id Sobic.008G053000.2,Sobic.008G053000.3
Synonym
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt A0A1Z5R5T4 , A0A1Z5R615
Pfam PF00560 PF00069 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF214
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os11g46970.1 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G007480.1 , HORVU7Hr1G007480.2
Wheat TraesCSU02G198500 , TraesCS1A02G229500 , TraesCSU02G190700 , TraesCS4A02G446600 , TraesCS4A02G446600 , TraesCS6D02G271500 , TraesCS5D02G444700 , TraesCS6B02G009000 , TraesCS5D02G557800 , TraesCS3B02G481000 , TraesCS6D02G396900 , TraesCS6D02G396900 , TraesCS6B02G320800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G021401 - -
2 Sobic.002G277366 - -
3 Sobic.002G237600 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
4 Sobic.001G452300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
5 Sobic.003G023100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
6 Sobic.003G120050 - -
7 Sobic.002G063201 - -
8 Sobic.008G008601 - -
9 Sobic.007G087500 hypothetical protein -
10 Sobic.004G013400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
11 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
12 Sobic.006G137900 heavy metal-associated domain containing protein, expressed -
13 Sobic.010G091750 - -
14 Sobic.007G007650 - -
15 Sobic.004G122700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
16 Sobic.002G289701 - -
17 Sobic.005G207600 - -
18 Sobic.004G184900 pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.003G060900 OsFBX320 - F-box domain containing protein, expressed -
20 Sobic.008G069901 - -


Gene co-expression network
sample Sobic008G053000 Sobic008G053000 Sobic003G021401 Sobic003G021401 Sobic008G053000--Sobic003G021401 Sobic002G277366 Sobic002G277366 Sobic008G053000--Sobic002G277366 Sobic002G237600 Sobic002G237600 Sobic008G053000--Sobic002G237600 Sobic001G452300 Sobic001G452300 Sobic008G053000--Sobic001G452300 Sobic003G023100 Sobic003G023100 Sobic008G053000--Sobic003G023100 Sobic003G120050 Sobic003G120050 Sobic008G053000--Sobic003G120050 Sobic002G063201 Sobic002G063201 Sobic008G053000--Sobic002G063201 Sobic008G008601 Sobic008G008601 Sobic008G053000--Sobic008G008601 Sobic007G087500 Sobic007G087500 Sobic008G053000--Sobic007G087500 Sobic003G021401--Sobic003G120050 Sobic003G021401--Sobic003G023100 Sobic003G021401--Sobic002G277366 Sobic003G021401--Sobic001G452300 Sobic003G021401--Sobic008G008601 Sobic004G013400 Sobic004G013400 Sobic003G021401--Sobic004G013400 Sobic006G137900 Sobic006G137900 Sobic003G021401--Sobic006G137900 Sobic003G021401--Sobic007G087500 Sobic001G190600 Sobic001G190600 Sobic003G021401--Sobic001G190600 Sobic002G277366--Sobic003G021401 Sobic002G277366--Sobic003G023100 Sobic002G277366--Sobic003G120050 Sobic003G323750 Sobic003G323750 Sobic002G277366--Sobic003G323750 Sobic002G277366--Sobic002G063201 Sobic010G091750 Sobic010G091750 Sobic002G277366--Sobic010G091750 Sobic006G077900 Sobic006G077900 Sobic002G277366--Sobic006G077900 Sobic002G277366--Sobic001G452300 Sobic002G277366--Sobic007G087500 Sobic002G237600--Sobic007G087500 Sobic002G237600--Sobic003G021401 Sobic002G237600--Sobic001G452300 Sobic002G237600--Sobic008G008601 Sobic002G237600--Sobic010G091750 Sobic004G184900 Sobic004G184900 Sobic002G237600--Sobic004G184900 Sobic002G237600--Sobic004G013400 Sobic006G004700 Sobic006G004700 Sobic002G237600--Sobic006G004700 Sobic008G053700 Sobic008G053700 Sobic002G237600--Sobic008G053700 Sobic001G452300--Sobic008G008601 Sobic001G452300--Sobic007G087500 Sobic004G122700 Sobic004G122700 Sobic001G452300--Sobic004G122700 Sobic008G069901 Sobic008G069901 Sobic001G452300--Sobic008G069901 Sobic002G063500 Sobic002G063500 Sobic001G452300--Sobic002G063500 Sobic001G452300--Sobic004G184900 Sobic008G008701 Sobic008G008701 Sobic001G452300--Sobic008G008701 Sobic004G090900 Sobic004G090900 Sobic001G452300--Sobic004G090900 Sobic001G033701 Sobic001G033701 Sobic001G452300--Sobic001G033701 Sobic003G023100--Sobic003G120050 Sobic003G023100--Sobic003G021401 Sobic004G200501 Sobic004G200501 Sobic003G023100--Sobic004G200501 Sobic010G146350 Sobic010G146350 Sobic003G023100--Sobic010G146350 Sobic005G207600 Sobic005G207600 Sobic003G023100--Sobic005G207600 Sobic003G023100--Sobic002G277366 Sobic010G228200 Sobic010G228200 Sobic003G023100--Sobic010G228200 Sobic003G023100--Sobic006G137900 Sobic007G120600 Sobic007G120600 Sobic003G023100--Sobic007G120600 Sobic003G120050--Sobic003G021401 Sobic003G120050--Sobic003G023100 Sobic003G120050--Sobic008G008601 Sobic003G120050--Sobic001G452300 Sobic003G120050--Sobic004G013400 Sobic003G120050--Sobic006G137900 Sobic001G138500 Sobic001G138500 Sobic003G120050--Sobic001G138500 Sobic003G120050--Sobic005G207600 Sobic003G120050--Sobic001G190600 Sobic002G063201--Sobic003G021401 Sobic002G063201--Sobic003G120050 Sobic002G063201--Sobic003G023100 Sobic002G063201--Sobic010G228200 Sobic002G063201--Sobic010G146350 Sobic002G063201--Sobic005G207600 Sobic002G063201--Sobic001G452300 Sobic004G327100 Sobic004G327100 Sobic002G063201--Sobic004G327100 Sobic002G063201--Sobic008G008601 Sobic008G008601--Sobic001G452300 Sobic008G008601--Sobic004G122700 Sobic008G008601--Sobic008G008701 Sobic008G008601--Sobic002G063500 Sobic008G008601--Sobic004G090900 Sobic008G008601--Sobic008G069901 Sobic008G008601--Sobic007G087500 Sobic008G008601--Sobic001G033701 Sobic008G008601--Sobic004G184900 Sobic007G087500--Sobic006G004700 Sobic007G087500--Sobic008G053700 Sobic007G087500--Sobic001G452300 Sobic007G087500--Sobic008G008601 Sobic007G087500--Sobic002G063500 Sobic007G087500--Sobic004G184900 Sobic007G087500--Sobic008G069901 Sobic007G087500--Sobic010G091750 Sobic003G046000 Sobic003G046000 Sobic007G087500--Sobic003G046000
Octagon: transcription factors


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