Gene annotation
Transcriptome id Sobic.008G104500.1,Sobic.008G104500.2
Synonym UPS2, Sb08g015630, ATUPS2
Functional annotation ureide permease, putative, expressed
UniProt A0A1B6PCZ6 , A0A1B6PCR7
Pfam PF07168
Panther DB PTHR31081 PTHR31081:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G03530 : ureide permease 2
RAP-DB (Rice) LOC_Os12g31850.3,LOC_Os12g31850.1 : ureide permease, putative, expressed
MaizeGDB (Corn) Zm00025a040406 , Zm00025a054179 , Zm00025a025589
Brachypodium -
Barley HORVU0Hr1G035620.6 , HORVU0Hr1G035620.7 , HORVU5Hr1G008750.1 , HORVU0Hr1G035620.5 , HORVU0Hr1G035620.2 , HORVU0Hr1G035620.4 , HORVU0Hr1G035620.1 , HORVU0Hr1G035620.3
Wheat TraesCS7B02G382000 , TraesCSU02G073900 , TraesCS7D02G466900 , TraesCS5B02G033900 , TraesCS5D02G116600 , TraesCS5A02G033200 , TraesCS7A02G479600 , TraesCS7D02G466800 , TraesCS5B02G033400 , TraesCS5B02G114400 , TraesCS7A02G479700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G138500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 27329702)@expressed protein -
2 Sobic.003G337100 expressed protein -
3 Sobic.002G064700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein 1-deoxy-D-xylulose-5-phosphate synthase (Os)(PubMedID : 27208977)@transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
4 Sobic.009G167300 CCT motif family protein, expressed -
5 Sobic.004G324900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.006G201200 peptide transporter PTR2, putative, expressed -
8 Sobic.006G209100 - -
9 Sobic.001G361500 expressed protein -
10 Sobic.005G037500 expressed protein -
11 Sobic.010G173550 - -
12 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -
13 Sobic.001G172900 - -
14 Sobic.002G205201 - -
15 Sobic.004G330500 expressed protein -
16 Sobic.006G185400 - -
17 Sobic.006G166300 WRKY36, expressed -
18 Sobic.002G037000 ZOS7-02 - C2H2 zinc finger protein, expressed -
19 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
20 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic008G104500 Sobic008G104500 Sobic002G138500 Sobic002G138500 Sobic008G104500--Sobic002G138500 Sobic003G337100 Sobic003G337100 Sobic008G104500--Sobic003G337100 Sobic002G064700 Sobic002G064700 Sobic008G104500--Sobic002G064700 Sobic009G167300 Sobic009G167300 Sobic008G104500--Sobic009G167300 Sobic004G324900 Sobic004G324900 Sobic008G104500--Sobic004G324900 Sobic010G231400 Sobic010G231400 Sobic008G104500--Sobic010G231400 Sobic006G201200 Sobic006G201200 Sobic008G104500--Sobic006G201200 Sobic006G209100 Sobic006G209100 Sobic008G104500--Sobic006G209100 Sobic001G361500 Sobic001G361500 Sobic008G104500--Sobic001G361500 Sobic002G138500--Sobic008G104500 Sobic002G138500--Sobic009G167300 Sobic002G138500--Sobic010G231400 Sobic002G138500--Sobic006G209100 Sobic002G138500--Sobic004G324900 Sobic002G138500--Sobic003G337100 Sobic002G138500--Sobic006G201200 Sobic005G037500 Sobic005G037500 Sobic002G138500--Sobic005G037500 Sobic006G185400 Sobic006G185400 Sobic002G138500--Sobic006G185400 Sobic003G337100--Sobic009G167300 Sobic004G342900 Sobic004G342900 Sobic003G337100--Sobic004G342900 Sobic002G326000 Sobic002G326000 Sobic003G337100--Sobic002G326000 Sobic010G158200 Sobic010G158200 Sobic003G337100--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G337100--Sobic010G045200 Sobic006G075801 Sobic006G075801 Sobic003G337100--Sobic006G075801 Sobic003G201300 Sobic003G201300 Sobic003G337100--Sobic003G201300 Sobic006G239100 Sobic006G239100 Sobic003G337100--Sobic006G239100 Sobic003G337100--Sobic010G231400 Sobic002G064700--Sobic009G167300 Sobic002G064700--Sobic003G337100 Sobic002G064700--Sobic002G326000 Sobic002G064700--Sobic010G045200 Sobic002G064700--Sobic006G075801 Sobic002G064700--Sobic003G201300 Sobic002G064700--Sobic006G209100 Sobic002G064700--Sobic006G201200 Sobic002G064700--Sobic004G342900 Sobic009G167300--Sobic006G209100 Sobic009G167300--Sobic003G201300 Sobic009G167300--Sobic010G231400 Sobic009G167300--Sobic006G201200 Sobic009G164200 Sobic009G164200 Sobic009G167300--Sobic009G164200 Sobic009G167300--Sobic001G361500 Sobic009G167300--Sobic006G185400 Sobic001G172900 Sobic001G172900 Sobic009G167300--Sobic001G172900 Sobic004G330500 Sobic004G330500 Sobic009G167300--Sobic004G330500 Sobic002G037000 Sobic002G037000 Sobic004G324900--Sobic002G037000 Sobic004G324900--Sobic005G037500 Sobic004G324900--Sobic006G209100 Sobic004G351866 Sobic004G351866 Sobic004G324900--Sobic004G351866 Sobic004G324900--Sobic001G361500 Sobic004G324900--Sobic006G185400 Sobic004G324900--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic004G324900--Sobic005G189400 Sobic008G023500 Sobic008G023500 Sobic004G324900--Sobic008G023500 Sobic007G152200 Sobic007G152200 Sobic010G231400--Sobic007G152200 Sobic010G231400--Sobic006G209100 Sobic010G231400--Sobic009G164200 Sobic010G231400--Sobic004G330500 Sobic010G231400--Sobic006G185400 Sobic010G231400--Sobic001G361500 Sobic010G231400--Sobic005G189400 Sobic002G205201 Sobic002G205201 Sobic010G231400--Sobic002G205201 Sobic010G231400--Sobic008G023500 Sobic006G201200--Sobic006G209100 Sobic006G201200--Sobic001G361500 Sobic006G201200--Sobic006G185400 Sobic006G201200--Sobic004G330500 Sobic010G275550 Sobic010G275550 Sobic006G201200--Sobic010G275550 Sobic006G201200--Sobic005G189400 Sobic006G201200--Sobic009G164200 Sobic006G201200--Sobic007G152200 Sobic006G201200--Sobic002G205201 Sobic006G209100--Sobic006G185400 Sobic006G209100--Sobic004G330500 Sobic006G209100--Sobic005G189400 Sobic006G209100--Sobic001G361500 Sobic006G209100--Sobic002G205201 Sobic006G209100--Sobic007G152200 Sobic006G209100--Sobic009G164200 Sobic006G209100--Sobic008G023500 Sobic006G209100--Sobic005G037500 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic001G361500--Sobic008G023500 Sobic001G361500--Sobic005G037500
Octagon: transcription factors


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