Gene annotation
Transcriptome id Sobic.008G171600.3,Sobic.008G171600.2,Sobic.008G171600.1
Synonym TT12, Sb08g021640, ATTT12
Functional annotation MATE efflux family protein, putative, expressed
UniProt A0A1Z5R850 , C5YS22
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF85
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT3G59030 : MATE efflux family protein
RAP-DB (Rice) LOC_Os12g42130.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ85776
Barley -
Wheat TraesCS5D02G041700 , TraesCS5A02G033400 , TraesCS5B02G355700 , TraesCS5B02G033600 , TraesCS5D02G360400 , TraesCS5A02G353300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G000700 SbANS is not expressed during fungal or MeJA-induced 3-deoxyanthocyanidin accumulation(PubMedID : 20529887)@leucoanthocyanidin dioxygenase, putative, expressed K05277: anthocyanidin synthase
2 Sobic.009G242250 - -
3 Sobic.003G230900 function as typical DFRs by accepting dihydroflavonol substrates(PubMedID : 20529887)@Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
4 Sobic.008G051700 GATA zinc finger domain containing protein, expressed -
5 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.006G227100 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
7 Sobic.001G495500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G249600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.004G014800 THION20 - Plant thionin family protein precursor, putative, expressed -
10 Sobic.003G245401 - -
11 Sobic.010G029500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
12 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
13 Sobic.007G125600 expressed protein -
14 Sobic.005G077700 - -
15 Sobic.005G080700 - -
16 Sobic.005G131100 expressed protein -
17 Sobic.004G048500 - -
18 Sobic.001G209701 - -
19 Sobic.001G209701 - -
20 Sobic.001G209701 - -


Gene co-expression network
sample Sobic008G171600 Sobic008G171600 Sobic004G000700 Sobic004G000700 Sobic008G171600--Sobic004G000700 Sobic009G242250 Sobic009G242250 Sobic008G171600--Sobic009G242250 Sobic003G230900 Sobic003G230900 Sobic008G171600--Sobic003G230900 Sobic008G051700 Sobic008G051700 Sobic008G171600--Sobic008G051700 Sobic010G156100 Sobic010G156100 Sobic008G171600--Sobic010G156100 Sobic006G227100 Sobic006G227100 Sobic008G171600--Sobic006G227100 Sobic001G495500 Sobic001G495500 Sobic008G171600--Sobic001G495500 Sobic001G249600 Sobic001G249600 Sobic008G171600--Sobic001G249600 Sobic004G014800 Sobic004G014800 Sobic008G171600--Sobic004G014800 Sobic004G000700--Sobic003G230900 Sobic004G000700--Sobic008G171600 Sobic004G000700--Sobic001G249600 Sobic009G151100 Sobic009G151100 Sobic004G000700--Sobic009G151100 Sobic004G000700--Sobic010G156100 Sobic006G227000 Sobic006G227000 Sobic004G000700--Sobic006G227000 Sobic004G179900 Sobic004G179900 Sobic004G000700--Sobic004G179900 Sobic002G428000 Sobic002G428000 Sobic004G000700--Sobic002G428000 Sobic001G480700 Sobic001G480700 Sobic004G000700--Sobic001G480700 Sobic001G209701 Sobic001G209701 Sobic009G242250--Sobic001G209701 Sobic003G230900--Sobic001G249600 Sobic003G230900--Sobic004G000700 Sobic003G230900--Sobic006G227000 Sobic001G249500 Sobic001G249500 Sobic003G230900--Sobic001G249500 Sobic002G128600 Sobic002G128600 Sobic003G230900--Sobic002G128600 Sobic006G253900 Sobic006G253900 Sobic003G230900--Sobic006G253900 Sobic008G030700 Sobic008G030700 Sobic003G230900--Sobic008G030700 Sobic006G175700 Sobic006G175700 Sobic003G230900--Sobic006G175700 Sobic005G190800 Sobic005G190800 Sobic003G230900--Sobic005G190800 Sobic006G118100 Sobic006G118100 Sobic008G051700--Sobic006G118100 Sobic003G404700 Sobic003G404700 Sobic008G051700--Sobic003G404700 Sobic008G051700--Sobic006G227100 Sobic009G039200 Sobic009G039200 Sobic008G051700--Sobic009G039200 Sobic008G126300 Sobic008G126300 Sobic008G051700--Sobic008G126300 Sobic007G040600 Sobic007G040600 Sobic008G051700--Sobic007G040600 Sobic006G022900 Sobic006G022900 Sobic008G051700--Sobic006G022900 Sobic005G147032 Sobic005G147032 Sobic008G051700--Sobic005G147032 Sobic005G227800 Sobic005G227800 Sobic008G051700--Sobic005G227800 Sobic003G308100 Sobic003G308100 Sobic010G156100--Sobic003G308100 Sobic006G111100 Sobic006G111100 Sobic010G156100--Sobic006G111100 Sobic010G156100--Sobic001G495500 Sobic003G142100 Sobic003G142100 Sobic010G156100--Sobic003G142100 Sobic003G283400 Sobic003G283400 Sobic010G156100--Sobic003G283400 Sobic003G365800 Sobic003G365800 Sobic010G156100--Sobic003G365800 Sobic004G072900 Sobic004G072900 Sobic010G156100--Sobic004G072900 Sobic006G123200 Sobic006G123200 Sobic010G156100--Sobic006G123200 Sobic010G156100--Sobic009G151100 Sobic006G227100--Sobic009G039200 Sobic005G098300 Sobic005G098300 Sobic006G227100--Sobic005G098300 Sobic005G147100 Sobic005G147100 Sobic006G227100--Sobic005G147100 Sobic008G188300 Sobic008G188300 Sobic006G227100--Sobic008G188300 Sobic010G010500 Sobic010G010500 Sobic006G227100--Sobic010G010500 Sobic005G223000 Sobic005G223000 Sobic006G227100--Sobic005G223000 Sobic008G120200 Sobic008G120200 Sobic006G227100--Sobic008G120200 Sobic005G221100 Sobic005G221100 Sobic006G227100--Sobic005G221100 Sobic010G191500 Sobic010G191500 Sobic006G227100--Sobic010G191500 Sobic001G495500--Sobic010G156100 Sobic003G274000 Sobic003G274000 Sobic001G495500--Sobic003G274000 Sobic001G495500--Sobic006G227100 Sobic009G125200 Sobic009G125200 Sobic001G495500--Sobic009G125200 Sobic005G151400 Sobic005G151400 Sobic001G495500--Sobic005G151400 Sobic002G027100 Sobic002G027100 Sobic001G495500--Sobic002G027100 Sobic001G495500--Sobic006G111100 Sobic006G131100 Sobic006G131100 Sobic001G495500--Sobic006G131100 Sobic005G179700 Sobic005G179700 Sobic001G495500--Sobic005G179700 Sobic001G249600--Sobic003G230900 Sobic001G249600--Sobic006G227000 Sobic001G249600--Sobic001G249500 Sobic001G249600--Sobic002G128600 Sobic001G249600--Sobic004G000700 Sobic001G249600--Sobic006G253900 Sobic001G249600--Sobic005G190800 Sobic001G249600--Sobic006G175700 Sobic007G069500 Sobic007G069500 Sobic001G249600--Sobic007G069500 Sobic004G014800--Sobic001G209701
Octagon: transcription factors


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