Gene annotation
Transcriptome id Sobic.008G189100.1
Synonym Sb08g022970
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5YT11
Pfam PF00561
Panther DB PTHR10992 PTHR10992:SF826
NCBI CDD KOG4178; Soluble epoxide hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51000 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g43970.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025072 , Zm00025a025071 , Zm00025a004856 , Zm00025a016385
Brachypodium -
Barley HORVU6Hr1G005400.9 , HORVU6Hr1G005400.8 , HORVU6Hr1G005400.3 , HORVU6Hr1G005400.1 , HORVU6Hr1G005400.7 , HORVU6Hr1G005400.6 , HORVU6Hr1G005400.5 , HORVU6Hr1G005400.4 , HORVU6Hr1G005400.11 , HORVU6Hr1G005400.10 , HORVU5Hr1G012890.6 , HORVU5Hr1G012890.5 , HORVU5Hr1G012890.4 , HORVU5Hr1G012890.3 , HORVU5Hr1G012890.2 , HORVU5Hr1G012890.1
Wheat TraesCS5D02G065000 , TraesCS6A02G029300 , TraesCS5A02G053600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
2 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
5 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
6 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
7 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
8 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
9 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
10 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
11 Sobic.001G338000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
12 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
13 Sobic.007G146350 - -
14 Sobic.001G535600 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.003G317800 lysM domain containing protein, putative -
16 Sobic.001G249600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.010G012400 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
18 Sobic.001G332966 - -
19 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase


Gene co-expression network
sample Sobic008G189100 Sobic008G189100 Sobic006G175700 Sobic006G175700 Sobic008G189100--Sobic006G175700 Sobic008G030700 Sobic008G030700 Sobic008G189100--Sobic008G030700 Sobic001G249500 Sobic001G249500 Sobic008G189100--Sobic001G249500 Sobic005G190800 Sobic005G190800 Sobic008G189100--Sobic005G190800 Sobic003G007800 Sobic003G007800 Sobic008G189100--Sobic003G007800 Sobic002G278800 Sobic002G278800 Sobic008G189100--Sobic002G278800 Sobic003G131800 Sobic003G131800 Sobic008G189100--Sobic003G131800 Sobic002G278700 Sobic002G278700 Sobic008G189100--Sobic002G278700 Sobic002G128600 Sobic002G128600 Sobic008G189100--Sobic002G128600 Sobic006G175700--Sobic005G190800 Sobic006G175700--Sobic008G030700 Sobic006G175700--Sobic002G278800 Sobic006G175700--Sobic003G007800 Sobic006G175700--Sobic001G249500 Sobic001G338000 Sobic001G338000 Sobic006G175700--Sobic001G338000 Sobic006G175700--Sobic002G128600 Sobic006G175700--Sobic003G131800 Sobic006G175700--Sobic002G278700 Sobic008G030700--Sobic006G175700 Sobic008G030700--Sobic002G278800 Sobic008G030700--Sobic002G278700 Sobic008G030700--Sobic001G249500 Sobic008G030700--Sobic003G131800 Sobic010G012400 Sobic010G012400 Sobic008G030700--Sobic010G012400 Sobic008G030700--Sobic005G190800 Sobic001G535600 Sobic001G535600 Sobic008G030700--Sobic001G535600 Sobic003G173700 Sobic003G173700 Sobic008G030700--Sobic003G173700 Sobic006G227000 Sobic006G227000 Sobic001G249500--Sobic006G227000 Sobic001G249500--Sobic002G128600 Sobic001G249500--Sobic006G175700 Sobic001G249500--Sobic008G030700 Sobic001G249500--Sobic005G190800 Sobic001G249600 Sobic001G249600 Sobic001G249500--Sobic001G249600 Sobic007G069500 Sobic007G069500 Sobic001G249500--Sobic007G069500 Sobic001G249500--Sobic003G007800 Sobic007G195300 Sobic007G195300 Sobic001G249500--Sobic007G195300 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic005G190800--Sobic006G227000 Sobic005G190800--Sobic001G249500 Sobic003G317800 Sobic003G317800 Sobic005G190800--Sobic003G317800 Sobic004G038300 Sobic004G038300 Sobic005G190800--Sobic004G038300 Sobic004G328900 Sobic004G328900 Sobic005G190800--Sobic004G328900 Sobic005G190800--Sobic007G069500 Sobic008G189500 Sobic008G189500 Sobic003G007800--Sobic008G189500 Sobic001G255300 Sobic001G255300 Sobic003G007800--Sobic001G255300 Sobic003G007800--Sobic005G190800 Sobic003G007800--Sobic006G175700 Sobic003G007800--Sobic004G328900 Sobic003G007800--Sobic003G317800 Sobic003G007800--Sobic002G128600 Sobic005G029400 Sobic005G029400 Sobic003G007800--Sobic005G029400 Sobic003G007800--Sobic004G038300 Sobic002G278800--Sobic002G278700 Sobic002G278800--Sobic003G173700 Sobic001G332966 Sobic001G332966 Sobic002G278800--Sobic001G332966 Sobic002G278800--Sobic003G131800 Sobic002G278800--Sobic008G030700 Sobic002G278800--Sobic006G175700 Sobic002G278800--Sobic010G012400 Sobic002G278800--Sobic001G338000 Sobic009G136500 Sobic009G136500 Sobic002G278800--Sobic009G136500 Sobic003G131800--Sobic002G278700 Sobic003G131800--Sobic002G278800 Sobic003G131800--Sobic008G030700 Sobic003G131800--Sobic006G175700 Sobic003G131800--Sobic007G195300 Sobic003G131800--Sobic010G012400 Sobic003G131800--Sobic003G173700 Sobic003G131800--Sobic001G249500 Sobic003G131800--Sobic009G136500 Sobic002G278700--Sobic002G278800 Sobic002G278700--Sobic010G012400 Sobic002G278700--Sobic003G131800 Sobic002G278700--Sobic008G030700 Sobic002G278700--Sobic003G173700 Sobic002G278700--Sobic001G332966 Sobic002G278700--Sobic006G175700 Sobic002G278700--Sobic009G136500 Sobic002G278700--Sobic001G338000 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic002G128600--Sobic001G249500 Sobic002G128600--Sobic004G328900 Sobic001G379300 Sobic001G379300 Sobic002G128600--Sobic001G379300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800
Octagon: transcription factors


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