Gene annotation
Transcriptome id Sobic.008G190800.1
Synonym lateral organ boundaries, SCP, LBD27, SbLBD27, Sb08g023100
Functional annotation "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt A0A1Z5R7I5
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47870 : LOB domain-containing protein 27
RAP-DB (Rice) LOC_Os08g31080.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G151000 protein kinase domain containing protein, expressed -
2 Sobic.009G096566 - -
3 Sobic.002G105501 - -
4 Sobic.007G220066 - -
5 Sobic.007G143900 expressed protein -
6 Sobic.006G084701 - -
7 Sobic.004G349500 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.004G351932 - -
9 Sobic.006G115400 ZOS4-08 - C2H2 zinc finger protein, expressed -
10 Sobic.002G290600 "domain confirmed by Pfam database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
11 Sobic.010G046200 NBS-LRR type disease resistance protein, putative, expressed -
12 Sobic.001G005400 - -
13 Sobic.004G050400 expressed protein -
14 Sobic.001G250900 - -
15 Sobic.009G066000 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.001G522800 - -
17 Sobic.003G120200 - -
18 Sobic.007G139950 - -
19 Sobic.004G051500 OsMADS80 - MADS-box family gene with M-alpha type-box, expressed -
20 Sobic.001G293550 - -


Gene co-expression network
sample Sobic008G190800 Sobic008G190800 Sobic005G151000 Sobic005G151000 Sobic008G190800--Sobic005G151000 Sobic009G096566 Sobic009G096566 Sobic008G190800--Sobic009G096566 Sobic002G105501 Sobic002G105501 Sobic008G190800--Sobic002G105501 Sobic007G220066 Sobic007G220066 Sobic008G190800--Sobic007G220066 Sobic007G143900 Sobic007G143900 Sobic008G190800--Sobic007G143900 Sobic006G084701 Sobic006G084701 Sobic008G190800--Sobic006G084701 Sobic004G349500 Sobic004G349500 Sobic008G190800--Sobic004G349500 Sobic004G351932 Sobic004G351932 Sobic008G190800--Sobic004G351932 Sobic006G115400 Sobic006G115400 Sobic008G190800--Sobic006G115400 Sobic005G151000--Sobic009G096566 Sobic005G151000--Sobic004G349500 Sobic001G005400 Sobic001G005400 Sobic005G151000--Sobic001G005400 Sobic005G151000--Sobic004G351932 Sobic001G522800 Sobic001G522800 Sobic005G151000--Sobic001G522800 Sobic005G151000--Sobic002G105501 Sobic005G151000--Sobic007G220066 Sobic001G250900 Sobic001G250900 Sobic005G151000--Sobic001G250900 Sobic004G251701 Sobic004G251701 Sobic005G151000--Sobic004G251701 Sobic009G096566--Sobic004G349500 Sobic009G096566--Sobic001G005400 Sobic009G096566--Sobic004G351932 Sobic009G096566--Sobic002G105501 Sobic009G096566--Sobic007G220066 Sobic004G051500 Sobic004G051500 Sobic009G096566--Sobic004G051500 Sobic009G096566--Sobic001G522800 Sobic004G252850 Sobic004G252850 Sobic009G096566--Sobic004G252850 Sobic009G096566--Sobic005G151000 Sobic002G105501--Sobic007G220066 Sobic009G066000 Sobic009G066000 Sobic002G105501--Sobic009G066000 Sobic007G139950 Sobic007G139950 Sobic002G105501--Sobic007G139950 Sobic002G105501--Sobic009G096566 Sobic002G105501--Sobic006G115400 Sobic003G386350 Sobic003G386350 Sobic002G105501--Sobic003G386350 Sobic002G105501--Sobic004G349500 Sobic003G331550 Sobic003G331550 Sobic002G105501--Sobic003G331550 Sobic010G046200 Sobic010G046200 Sobic002G105501--Sobic010G046200 Sobic007G220066--Sobic002G105501 Sobic007G220066--Sobic009G066000 Sobic007G220066--Sobic007G139950 Sobic007G220066--Sobic009G096566 Sobic007G220066--Sobic006G115400 Sobic007G220066--Sobic003G386350 Sobic007G220066--Sobic004G349500 Sobic007G220066--Sobic003G331550 Sobic007G220066--Sobic010G046200 Sobic007G143900--Sobic006G115400 Sobic007G143900--Sobic009G066000 Sobic003G384100 Sobic003G384100 Sobic007G143900--Sobic003G384100 Sobic007G143900--Sobic007G139950 Sobic007G143900--Sobic007G220066 Sobic007G143900--Sobic002G105501 Sobic004G056100 Sobic004G056100 Sobic007G143900--Sobic004G056100 Sobic007G143900--Sobic010G046200 Sobic003G399166 Sobic003G399166 Sobic007G143900--Sobic003G399166 Sobic003G089900 Sobic003G089900 Sobic006G084701--Sobic003G089900 Sobic007G172900 Sobic007G172900 Sobic006G084701--Sobic007G172900 Sobic006G084701--Sobic005G151000 Sobic006G084701--Sobic009G096566 Sobic003G120200 Sobic003G120200 Sobic006G084701--Sobic003G120200 Sobic006G084701--Sobic002G105501 Sobic006G084701--Sobic007G220066 Sobic006G084701--Sobic010G046200 Sobic002G303200 Sobic002G303200 Sobic006G084701--Sobic002G303200 Sobic004G349500--Sobic009G096566 Sobic004G349500--Sobic001G005400 Sobic004G349500--Sobic004G351932 Sobic004G349500--Sobic001G522800 Sobic004G349500--Sobic004G051500 Sobic004G349500--Sobic004G252850 Sobic003G307500 Sobic003G307500 Sobic004G349500--Sobic003G307500 Sobic004G349500--Sobic004G251701 Sobic004G349500--Sobic002G105501 Sobic004G351932--Sobic004G349500 Sobic004G351932--Sobic009G096566 Sobic004G351932--Sobic001G005400 Sobic004G351932--Sobic001G522800 Sobic004G351932--Sobic004G051500 Sobic004G351932--Sobic004G252850 Sobic004G351932--Sobic003G307500 Sobic010G082300 Sobic010G082300 Sobic004G351932--Sobic010G082300 Sobic004G351932--Sobic004G251701 Sobic006G115400--Sobic007G139950 Sobic006G115400--Sobic009G066000 Sobic006G115400--Sobic003G331550 Sobic003G162200 Sobic003G162200 Sobic006G115400--Sobic003G162200 Sobic006G115400--Sobic007G220066 Sobic006G115400--Sobic002G105501 Sobic002G341400 Sobic002G341400 Sobic006G115400--Sobic002G341400 Sobic006G115400--Sobic007G172900 Sobic003G049100 Sobic003G049100 Sobic006G115400--Sobic003G049100
Octagon: transcription factors


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