Gene annotation
Transcriptome id Sobic.009G022500.1
Synonym Sb09g001940
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
white-brown complex homolog protein 16, putative, expressed
UniProt C5YZ02
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF294
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G39350 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os05g02890.1 : white-brown complex homolog protein 16, putative, expressed
MaizeGDB (Corn) Zm00025a038219 , Zm00025a001906 , Zm00025a039705 , Zm00025a040796
Brachypodium KQK22254 , KQK21748 , KQK22252
Barley HORVU5Hr1G021120.1 , HORVU5Hr1G021120.3 , HORVU5Hr1G021120.2 , HORVU3Hr1G007180.1 , HORVU5Hr1G021110.1 , HORVU5Hr1G021110.2 , HORVU1Hr1G009920.3 , HORVU1Hr1G009920.2 , HORVU1Hr1G009920.1 , HORVU4Hr1G058070.2 , HORVU4Hr1G058070.3 , HORVU4Hr1G058070.1
Wheat TraesCS1A02G049600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261412 - -
2 Sobic.004G087200 flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed -
3 Sobic.008G153900 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.004G131350 - -
5 Sobic.009G052901 - -
6 Sobic.010G091366 - -
7 Sobic.001G075950 - -
8 Sobic.005G129748 - -
9 Sobic.003G316400 expressed protein -
10 Sobic.007G128900 cytokinin inducible protein, putative, expressed -
11 Sobic.010G233300 ZOS6-07 - C2H2 zinc finger protein, expressed -
12 Sobic.001G318366 - -
13 Sobic.009G168700 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
14 Sobic.002G323500 lipase class 3 family protein, putative, expressed -
15 Sobic.010G021600 - -
16 Sobic.009G150100 expressed protein -
17 Sobic.006G234000 expressed protein -
18 Sobic.001G450100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
19 Sobic.004G019900 GTP-binding protein, putative, expressed -
20 Sobic.007G100275 - -


Gene co-expression network
sample Sobic009G022500 Sobic009G022500 Sobic001G261412 Sobic001G261412 Sobic009G022500--Sobic001G261412 Sobic004G087200 Sobic004G087200 Sobic009G022500--Sobic004G087200 Sobic008G153900 Sobic008G153900 Sobic009G022500--Sobic008G153900 Sobic004G131350 Sobic004G131350 Sobic009G022500--Sobic004G131350 Sobic009G052901 Sobic009G052901 Sobic009G022500--Sobic009G052901 Sobic010G091366 Sobic010G091366 Sobic009G022500--Sobic010G091366 Sobic001G075950 Sobic001G075950 Sobic009G022500--Sobic001G075950 Sobic005G129748 Sobic005G129748 Sobic009G022500--Sobic005G129748 Sobic003G316400 Sobic003G316400 Sobic009G022500--Sobic003G316400 Sobic001G261412--Sobic005G129748 Sobic001G318366 Sobic001G318366 Sobic001G261412--Sobic001G318366 Sobic010G021600 Sobic010G021600 Sobic001G261412--Sobic010G021600 Sobic001G261412--Sobic009G052901 Sobic005G082950 Sobic005G082950 Sobic001G261412--Sobic005G082950 Sobic001G272300 Sobic001G272300 Sobic001G261412--Sobic001G272300 Sobic002G284600 Sobic002G284600 Sobic004G087200--Sobic002G284600 Sobic004G087200--Sobic009G022500 Sobic009G237350 Sobic009G237350 Sobic004G087200--Sobic009G237350 Sobic002G054901 Sobic002G054901 Sobic004G087200--Sobic002G054901 Sobic004G087200--Sobic003G316400 Sobic008G100950 Sobic008G100950 Sobic004G087200--Sobic008G100950 Sobic003G311250 Sobic003G311250 Sobic004G087200--Sobic003G311250 Sobic009G011800 Sobic009G011800 Sobic004G087200--Sobic009G011800 Sobic004G087200--Sobic010G091366 Sobic007G141001 Sobic007G141001 Sobic008G153900--Sobic007G141001 Sobic004G082200 Sobic004G082200 Sobic008G153900--Sobic004G082200 Sobic006G053500 Sobic006G053500 Sobic008G153900--Sobic006G053500 Sobic004G019900 Sobic004G019900 Sobic008G153900--Sobic004G019900 Sobic003G091100 Sobic003G091100 Sobic008G153900--Sobic003G091100 Sobic008G153900--Sobic004G131350 Sobic008G153900--Sobic010G091366 Sobic001G218701 Sobic001G218701 Sobic008G153900--Sobic001G218701 Sobic008G153900--Sobic001G272300 Sobic004G131350--Sobic008G153900 Sobic004G131350--Sobic006G053500 Sobic004G131350--Sobic010G091366 Sobic004G131350--Sobic001G318366 Sobic004G131350--Sobic004G082200 Sobic004G131350--Sobic007G141001 Sobic004G338400 Sobic004G338400 Sobic004G131350--Sobic004G338400 Sobic001G041450 Sobic001G041450 Sobic004G131350--Sobic001G041450 Sobic005G156800 Sobic005G156800 Sobic004G131350--Sobic005G156800 Sobic009G052901--Sobic005G129748 Sobic007G128900 Sobic007G128900 Sobic009G052901--Sobic007G128900 Sobic009G052901--Sobic001G261412 Sobic009G052901--Sobic010G021600 Sobic009G168700 Sobic009G168700 Sobic009G052901--Sobic009G168700 Sobic006G149650 Sobic006G149650 Sobic009G052901--Sobic006G149650 Sobic009G052901--Sobic005G082950 Sobic008G192100 Sobic008G192100 Sobic009G052901--Sobic008G192100 Sobic009G052901--Sobic001G272300 Sobic005G181700 Sobic005G181700 Sobic010G091366--Sobic005G181700 Sobic002G069601 Sobic002G069601 Sobic010G091366--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic010G091366--Sobic003G318400 Sobic007G059800 Sobic007G059800 Sobic010G091366--Sobic007G059800 Sobic003G034250 Sobic003G034250 Sobic010G091366--Sobic003G034250 Sobic010G091366--Sobic006G053500 Sobic010G091366--Sobic004G082200 Sobic009G150100 Sobic009G150100 Sobic010G091366--Sobic009G150100 Sobic004G201200 Sobic004G201200 Sobic010G091366--Sobic004G201200 Sobic001G075950--Sobic009G150100 Sobic001G322766 Sobic001G322766 Sobic001G075950--Sobic001G322766 Sobic004G289700 Sobic004G289700 Sobic001G075950--Sobic004G289700 Sobic007G100275 Sobic007G100275 Sobic001G075950--Sobic007G100275 Sobic001G256600 Sobic001G256600 Sobic001G075950--Sobic001G256600 Sobic010G233300 Sobic010G233300 Sobic001G075950--Sobic010G233300 Sobic003G261700 Sobic003G261700 Sobic001G075950--Sobic003G261700 Sobic001G075950--Sobic003G091100 Sobic009G066850 Sobic009G066850 Sobic001G075950--Sobic009G066850 Sobic005G129748--Sobic010G021600 Sobic005G129748--Sobic005G082950 Sobic005G129748--Sobic001G261412 Sobic005G129748--Sobic009G052901 Sobic005G129748--Sobic008G192100 Sobic005G129748--Sobic001G272300 Sobic003G399900 Sobic003G399900 Sobic003G316400--Sobic003G399900 Sobic003G316400--Sobic008G153900 Sobic003G316400--Sobic004G131350 Sobic003G316400--Sobic009G237350 Sobic003G316400--Sobic006G053500 Sobic002G264100 Sobic002G264100 Sobic003G316400--Sobic002G264100 Sobic003G316400--Sobic004G087200 Sobic003G316400--Sobic010G091366 Sobic003G316400--Sobic002G054901
Octagon: transcription factors


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