Gene annotation
Transcriptome id Sobic.009G180700.1
Synonym TGA2, AHBP-1B, Sb09g024110
Functional annotation transcription factor, putative, expressed
UniProt A0A1B6P931
Pfam PF14144 PF00170
Panther DB PTHR22952:SF209 PTHR22952
NCBI CDD -
KEGG Orthology K14431; transcription factor TGA
Gene Ontology GO:0006351; transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT3G12250 : TGACG motif-binding factor 6
RAP-DB (Rice) LOC_Os01g59350.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a037841
Brachypodium KQK05643 , KQK10238
Barley HORVU3Hr1G079010.11 , HORVU3Hr1G079010.8 , HORVU3Hr1G079010.2 , HORVU3Hr1G079010.3 , HORVU3Hr1G079010.1 , HORVU3Hr1G079010.6 , HORVU3Hr1G079010.7 , HORVU3Hr1G079010.4 , HORVU3Hr1G079010.5 , HORVU3Hr1G079010.18 , HORVU3Hr1G079010.19 , HORVU3Hr1G079010.13 , HORVU3Hr1G079010.14 , HORVU3Hr1G079010.15 , HORVU3Hr1G079010.16 , HORVU3Hr1G079010.17 , HORVU3Hr1G079010.20 , HORVU3Hr1G079010.23 , HORVU3Hr1G079010.22
Wheat TraesCS1A02G096300 , TraesCS3A02G334100 , TraesCS3D02G327600 , TraesCS3B02G365100 , TraesCS1D02G105300 , TraesCS1D02G105300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G077750 - -
2 Sobic.002G258500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
3 Sobic.009G111301 - -
4 Sobic.010G035100 AP2 domain containing protein, expressed -
5 Sobic.009G019550 - -
6 Sobic.007G125800 expressed protein -
7 Sobic.002G346700 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.004G316000 DEFL74 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.002G346800 YABBY domain containing protein, putative, expressed -
10 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
11 Sobic.002G023500 expressed protein -
12 Sobic.003G175700 - -
13 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.010G130900 glycine rich protein family protein, putative, expressed -
15 Sobic.001G123650 - -
16 Sobic.001G123650 - -
17 Sobic.001G123650 - -
18 Sobic.001G123650 - -
19 Sobic.001G123650 - -
20 Sobic.001G123650 - -


Gene co-expression network
sample Sobic009G180700 Sobic009G180700 Sobic005G077750 Sobic005G077750 Sobic009G180700--Sobic005G077750 Sobic002G258500 Sobic002G258500 Sobic009G180700--Sobic002G258500 Sobic009G111301 Sobic009G111301 Sobic009G180700--Sobic009G111301 Sobic010G035100 Sobic010G035100 Sobic009G180700--Sobic010G035100 Sobic009G019550 Sobic009G019550 Sobic009G180700--Sobic009G019550 Sobic007G125800 Sobic007G125800 Sobic009G180700--Sobic007G125800 Sobic002G346700 Sobic002G346700 Sobic009G180700--Sobic002G346700 Sobic004G316000 Sobic004G316000 Sobic009G180700--Sobic004G316000 Sobic002G346800 Sobic002G346800 Sobic009G180700--Sobic002G346800 Sobic005G077750--Sobic009G180700 Sobic005G077750--Sobic009G111301 Sobic006G199400 Sobic006G199400 Sobic005G077750--Sobic006G199400 Sobic002G344201 Sobic002G344201 Sobic005G077750--Sobic002G344201 Sobic005G077750--Sobic010G035100 Sobic005G077750--Sobic002G258500 Sobic005G077750--Sobic002G346800 Sobic005G077750--Sobic009G019550 Sobic005G077750--Sobic007G125800 Sobic002G258500--Sobic004G316000 Sobic002G023500 Sobic002G023500 Sobic002G258500--Sobic002G023500 Sobic010G130900 Sobic010G130900 Sobic002G258500--Sobic010G130900 Sobic002G258500--Sobic002G346700 Sobic007G014300 Sobic007G014300 Sobic002G258500--Sobic007G014300 Sobic001G123650 Sobic001G123650 Sobic002G258500--Sobic001G123650 Sobic009G111301--Sobic002G258500 Sobic003G231000 Sobic003G231000 Sobic009G111301--Sobic003G231000 Sobic009G111301--Sobic010G035100 Sobic009G111301--Sobic002G346700 Sobic002G066350 Sobic002G066350 Sobic009G111301--Sobic002G066350 Sobic007G036200 Sobic007G036200 Sobic009G111301--Sobic007G036200 Sobic009G111301--Sobic002G023500 Sobic009G111301--Sobic005G077750 Sobic009G111301--Sobic010G130900 Sobic010G035100--Sobic002G258500 Sobic010G035100--Sobic002G346700 Sobic006G006400 Sobic006G006400 Sobic010G035100--Sobic006G006400 Sobic010G035100--Sobic004G316000 Sobic010G035100--Sobic009G019550 Sobic010G035100--Sobic002G023500 Sobic006G239600 Sobic006G239600 Sobic010G035100--Sobic006G239600 Sobic010G035100--Sobic001G123650 Sobic010G237400 Sobic010G237400 Sobic009G019550--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic009G019550--Sobic003G369800 Sobic009G019550--Sobic002G346700 Sobic009G019550--Sobic004G316000 Sobic004G056500 Sobic004G056500 Sobic009G019550--Sobic004G056500 Sobic002G102800 Sobic002G102800 Sobic009G019550--Sobic002G102800 Sobic010G144600 Sobic010G144600 Sobic009G019550--Sobic010G144600 Sobic009G059800 Sobic009G059800 Sobic009G019550--Sobic009G059800 Sobic009G019550--Sobic002G258500 Sobic004G015000 Sobic004G015000 Sobic007G125800--Sobic004G015000 Sobic005G189500 Sobic005G189500 Sobic007G125800--Sobic005G189500 Sobic007G048300 Sobic007G048300 Sobic007G125800--Sobic007G048300 Sobic007G125800--Sobic009G019550 Sobic007G125800--Sobic002G346700 Sobic007G125800--Sobic010G035100 Sobic007G125800--Sobic002G258500 Sobic003G020700 Sobic003G020700 Sobic007G125800--Sobic003G020700 Sobic007G125800--Sobic004G316000 Sobic002G346700--Sobic004G316000 Sobic002G346700--Sobic002G258500 Sobic002G346700--Sobic002G023500 Sobic002G346700--Sobic010G130900 Sobic002G346700--Sobic002G066350 Sobic002G346700--Sobic007G014300 Sobic002G346700--Sobic001G123650 Sobic004G316000--Sobic007G014300 Sobic004G316000--Sobic001G123650 Sobic001G274100 Sobic001G274100 Sobic002G346800--Sobic001G274100 Sobic002G346800--Sobic009G180700 Sobic002G346800--Sobic005G077750 Sobic002G346800--Sobic002G258500 Sobic002G346800--Sobic009G111301 Sobic002G346800--Sobic010G035100 Sobic002G346800--Sobic003G369800 Sobic002G346800--Sobic002G344201 Sobic002G346800--Sobic010G237400
Octagon: transcription factors


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