Gene annotation
Transcriptome id Sobic.010G077900.1
Synonym Sb10g006770
Functional annotation oxidoreductase/ transition metal ion binding protein, putative, expressed
UniProt C5Z6D2
Pfam -
Panther DB PTHR33306 PTHR33306:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g53510.1 : oxidoreductase/ transition metal ion binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G006701 - -
2 Sobic.002G260100 - -
3 Sobic.010G043300 expressed protein -
4 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.007G010350 - -
6 Sobic.008G057500 Aldehyde dehydrogenase 3 H1(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
7 Sobic.005G099400 ubiquitin family protein, putative, expressed -
8 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
9 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
10 Sobic.006G059400 - -
11 Sobic.010G200900 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
13 Sobic.004G149200 ankyrin, putative, expressed -
14 Sobic.001G359100 cytochrome P450, putative, expressed -
15 Sobic.006G067300 OsFBX103 - F-box domain containing protein, expressed -
16 Sobic.001G092650 - -
17 Sobic.007G219300 BURP domain containing protein, expressed -
18 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
19 Sobic.001G092700 - -
20 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -


Gene co-expression network
sample Sobic010G077900 Sobic010G077900 Sobic005G006701 Sobic005G006701 Sobic010G077900--Sobic005G006701 Sobic002G260100 Sobic002G260100 Sobic010G077900--Sobic002G260100 Sobic010G043300 Sobic010G043300 Sobic010G077900--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic010G077900--Sobic004G089400 Sobic007G010350 Sobic007G010350 Sobic010G077900--Sobic007G010350 Sobic008G057500 Sobic008G057500 Sobic010G077900--Sobic008G057500 Sobic005G099400 Sobic005G099400 Sobic010G077900--Sobic005G099400 Sobic003G164300 Sobic003G164300 Sobic010G077900--Sobic003G164300 Sobic003G062900 Sobic003G062900 Sobic010G077900--Sobic003G062900 Sobic005G006701--Sobic004G089400 Sobic005G006701--Sobic010G043300 Sobic004G149200 Sobic004G149200 Sobic005G006701--Sobic004G149200 Sobic005G006701--Sobic007G010350 Sobic006G067300 Sobic006G067300 Sobic005G006701--Sobic006G067300 Sobic005G006701--Sobic002G260100 Sobic001G092700 Sobic001G092700 Sobic005G006701--Sobic001G092700 Sobic005G006701--Sobic003G062900 Sobic005G006701--Sobic003G164300 Sobic006G059400 Sobic006G059400 Sobic002G260100--Sobic006G059400 Sobic001G359100 Sobic001G359100 Sobic002G260100--Sobic001G359100 Sobic003G070200 Sobic003G070200 Sobic002G260100--Sobic003G070200 Sobic001G153800 Sobic001G153800 Sobic002G260100--Sobic001G153800 Sobic002G260100--Sobic003G062900 Sobic002G334400 Sobic002G334400 Sobic002G260100--Sobic002G334400 Sobic009G087900 Sobic009G087900 Sobic002G260100--Sobic009G087900 Sobic002G305400 Sobic002G305400 Sobic002G260100--Sobic002G305400 Sobic002G260100--Sobic004G089400 Sobic010G043300--Sobic005G006701 Sobic007G219300 Sobic007G219300 Sobic010G043300--Sobic007G219300 Sobic010G043300--Sobic007G010350 Sobic001G092650 Sobic001G092650 Sobic010G043300--Sobic001G092650 Sobic003G180700 Sobic003G180700 Sobic010G043300--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic010G043300--Sobic001G355300 Sobic010G043300--Sobic001G092700 Sobic009G067100 Sobic009G067100 Sobic010G043300--Sobic009G067100 Sobic007G083500 Sobic007G083500 Sobic010G043300--Sobic007G083500 Sobic004G089400--Sobic005G006701 Sobic004G089400--Sobic004G149200 Sobic004G089400--Sobic003G062900 Sobic004G089400--Sobic010G043300 Sobic004G089400--Sobic002G260100 Sobic004G089400--Sobic006G059400 Sobic004G089400--Sobic006G067300 Sobic004G089400--Sobic003G070200 Sobic004G089400--Sobic001G359100 Sobic007G010350--Sobic010G043300 Sobic007G010350--Sobic005G006701 Sobic007G010350--Sobic003G164300 Sobic007G010350--Sobic007G219300 Sobic007G010350--Sobic001G092650 Sobic007G010350--Sobic003G180700 Sobic007G010350--Sobic001G355300 Sobic007G010350--Sobic001G092700 Sobic007G010350--Sobic009G067100 Sobic008G057500--Sobic006G067300 Sobic008G057500--Sobic005G006701 Sobic008G057500--Sobic010G043300 Sobic008G057500--Sobic004G089400 Sobic009G180300 Sobic009G180300 Sobic008G057500--Sobic009G180300 Sobic008G057500--Sobic007G010350 Sobic008G057500--Sobic003G164300 Sobic008G057500--Sobic007G219300 Sobic008G057500--Sobic004G149200 Sobic005G099400--Sobic005G006701 Sobic005G099400--Sobic004G089400 Sobic004G022366 Sobic004G022366 Sobic005G099400--Sobic004G022366 Sobic005G099400--Sobic010G043300 Sobic005G099400--Sobic004G149200 Sobic005G099400--Sobic002G260100 Sobic005G099400--Sobic010G077900 Sobic001G215201 Sobic001G215201 Sobic005G099400--Sobic001G215201 Sobic005G099400--Sobic003G164300 Sobic003G164300--Sobic010G043300 Sobic003G164300--Sobic007G010350 Sobic003G164300--Sobic007G219300 Sobic003G164300--Sobic006G067300 Sobic003G164300--Sobic003G180700 Sobic003G164300--Sobic001G355300 Sobic003G164300--Sobic001G092650 Sobic003G164300--Sobic009G067100 Sobic003G164300--Sobic007G083500 Sobic003G062900--Sobic006G059400 Sobic003G062900--Sobic001G359100 Sobic003G062900--Sobic003G070200 Sobic003G062900--Sobic001G153800 Sobic003G062900--Sobic002G260100 Sobic003G062900--Sobic002G334400 Sobic003G062900--Sobic009G087900 Sobic003G062900--Sobic002G305400 Sobic003G062900--Sobic004G089400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.