Gene annotation
Transcriptome id Sobic.010G090850.1
Synonym -
Functional annotation -
UniProt A0A1W0VS29
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G18060 : vascular related NAC-domain protein 1
RAP-DB (Rice) LOC_Os07g09740.1 : no apical meristem protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G030801 - -
2 Sobic.010G215201 - -
3 Sobic.001G297900 aminotransferase, classes I and II, domain containing protein, expressed K00652: 8-amino-7-oxononanoate synthase
4 Sobic.002G055000 bZIP transcription factor domain containing protein, expressed -
5 Sobic.001G480900 glyoxalase family protein, putative, expressed -
6 Sobic.006G049633 - -
7 Sobic.010G011500 - -
8 Sobic.001G071500 - -
9 Sobic.004G296750 - -
10 Sobic.003G229900 - -
11 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
12 Sobic.002G266700 - -
13 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
14 Sobic.008G061900 - -
15 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
16 Sobic.003G089500 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
17 Sobic.001G310000 - -
18 Sobic.001G164700 expressed protein -
19 Sobic.001G242400 - -
20 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -


Gene co-expression network
sample Sobic010G090850 Sobic010G090850 Sobic008G030801 Sobic008G030801 Sobic010G090850--Sobic008G030801 Sobic010G215201 Sobic010G215201 Sobic010G090850--Sobic010G215201 Sobic001G297900 Sobic001G297900 Sobic010G090850--Sobic001G297900 Sobic002G055000 Sobic002G055000 Sobic010G090850--Sobic002G055000 Sobic001G480900 Sobic001G480900 Sobic010G090850--Sobic001G480900 Sobic006G049633 Sobic006G049633 Sobic010G090850--Sobic006G049633 Sobic010G011500 Sobic010G011500 Sobic010G090850--Sobic010G011500 Sobic001G071500 Sobic001G071500 Sobic010G090850--Sobic001G071500 Sobic004G296750 Sobic004G296750 Sobic010G090850--Sobic004G296750 Sobic008G030801--Sobic001G071500 Sobic008G030801--Sobic010G011500 Sobic008G030801--Sobic001G297900 Sobic008G030801--Sobic002G055000 Sobic008G030801--Sobic010G215201 Sobic008G030801--Sobic001G480900 Sobic003G229900 Sobic003G229900 Sobic008G030801--Sobic003G229900 Sobic008G030801--Sobic006G049633 Sobic002G054800 Sobic002G054800 Sobic008G030801--Sobic002G054800 Sobic010G215201--Sobic002G054800 Sobic010G215201--Sobic001G071500 Sobic002G240200 Sobic002G240200 Sobic010G215201--Sobic002G240200 Sobic005G073300 Sobic005G073300 Sobic010G215201--Sobic005G073300 Sobic010G215201--Sobic008G030801 Sobic002G132201 Sobic002G132201 Sobic010G215201--Sobic002G132201 Sobic002G172300 Sobic002G172300 Sobic010G215201--Sobic002G172300 Sobic001G371650 Sobic001G371650 Sobic010G215201--Sobic001G371650 Sobic001G421100 Sobic001G421100 Sobic010G215201--Sobic001G421100 Sobic001G297900--Sobic002G055000 Sobic001G297900--Sobic010G011500 Sobic001G297900--Sobic001G480900 Sobic001G297900--Sobic008G030801 Sobic001G297900--Sobic006G049633 Sobic001G297900--Sobic004G296750 Sobic002G266700 Sobic002G266700 Sobic001G297900--Sobic002G266700 Sobic001G297900--Sobic003G229900 Sobic003G281000 Sobic003G281000 Sobic001G297900--Sobic003G281000 Sobic002G055000--Sobic001G480900 Sobic002G055000--Sobic010G011500 Sobic002G055000--Sobic004G296750 Sobic002G055000--Sobic006G049633 Sobic002G055000--Sobic003G281000 Sobic002G055000--Sobic001G297900 Sobic002G055000--Sobic002G266700 Sobic002G055000--Sobic003G229900 Sobic002G055000--Sobic008G030801 Sobic001G480900--Sobic002G055000 Sobic001G480900--Sobic004G296750 Sobic001G480900--Sobic010G011500 Sobic001G480900--Sobic003G281000 Sobic001G480900--Sobic006G049633 Sobic001G480900--Sobic002G266700 Sobic001G480900--Sobic001G297900 Sobic001G480900--Sobic003G229900 Sobic008G061900 Sobic008G061900 Sobic001G480900--Sobic008G061900 Sobic006G049633--Sobic003G229900 Sobic006G049633--Sobic002G055000 Sobic006G049633--Sobic004G296750 Sobic006G049633--Sobic001G480900 Sobic006G049633--Sobic002G266700 Sobic006G049633--Sobic010G011500 Sobic006G049633--Sobic008G061900 Sobic006G049633--Sobic003G281000 Sobic007G007100 Sobic007G007100 Sobic006G049633--Sobic007G007100 Sobic010G011500--Sobic002G055000 Sobic010G011500--Sobic001G480900 Sobic010G011500--Sobic004G296750 Sobic010G011500--Sobic003G281000 Sobic010G011500--Sobic006G049633 Sobic010G011500--Sobic002G266700 Sobic010G011500--Sobic001G297900 Sobic010G011500--Sobic003G229900 Sobic010G011500--Sobic008G030801 Sobic001G071500--Sobic002G054800 Sobic001G071500--Sobic005G073300 Sobic001G071500--Sobic002G240200 Sobic001G071500--Sobic010G215201 Sobic001G071500--Sobic002G132201 Sobic001G071500--Sobic008G030801 Sobic001G071500--Sobic002G172300 Sobic003G149700 Sobic003G149700 Sobic001G071500--Sobic003G149700 Sobic001G071500--Sobic001G371650 Sobic004G296750--Sobic001G480900 Sobic004G296750--Sobic002G055000 Sobic004G296750--Sobic003G281000 Sobic004G296750--Sobic006G049633 Sobic004G296750--Sobic010G011500 Sobic004G296750--Sobic002G266700 Sobic002G202050 Sobic002G202050 Sobic004G296750--Sobic002G202050
Octagon: transcription factors


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