Gene annotation
Transcriptome id Sobic.001G164700.1
Synonym Sb01g014360
Functional annotation expressed protein
UniProt C5WS83
Pfam -
Panther DB PTHR33156 PTHR33156:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15000 : -
RAP-DB (Rice) LOC_Os03g42480.1 : expressed protein
MaizeGDB (Corn) Zm00025a007392
Brachypodium KQK14135 , PNT74418 , PNT74419 , PNT74416 , PNT74417 , PNT74420
Barley HORVU4Hr1G012070.10 , HORVU4Hr1G012070.3 , HORVU4Hr1G012070.16 , HORVU4Hr1G012070.14 , HORVU4Hr1G012070.7 , HORVU4Hr1G012070.12 , HORVU4Hr1G012070.2 , HORVU4Hr1G012070.11 , HORVU4Hr1G012070.8 , HORVU4Hr1G012070.9
Wheat TraesCS4D02G071400 , TraesCS4B02G072600 , TraesCS4A02G242500
Populus -


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cDNA sequences
Sobic.001G164700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G090850 - -
2 Sobic.001G297900 aminotransferase, classes I and II, domain containing protein, expressed K00652: 8-amino-7-oxononanoate synthase
3 Sobic.010G246300 Zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.002G055000 bZIP transcription factor domain containing protein, expressed -
5 Sobic.001G480900 glyoxalase family protein, putative, expressed -
6 Sobic.008G030801 - -
7 Sobic.002G266700 - -
8 Sobic.010G011500 - -
9 Sobic.003G089500 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
10 Sobic.010G215201 - -
11 Sobic.001G242400 - -
12 Sobic.001G308900 zinc finger, C3HC4 type domain containing protein, expressed K15691: E3 ubiquitin-protein ligase RFWD3
13 Sobic.004G296750 - -
14 Sobic.003G155700 transcription initiation factor IID, 18kD subunit family protein, expressed K03127: transcription initiation factor TFIID subunit 13
15 Sobic.006G049633 - -
16 Sobic.003G281000 - -
17 Sobic.003G229900 - -
18 Sobic.001G310000 - -
19 Sobic.002G172300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G020150 - -


Gene co-expression network
sample Sobic001G164700 Sobic001G164700 Sobic010G090850 Sobic010G090850 Sobic001G164700--Sobic010G090850 Sobic001G297900 Sobic001G297900 Sobic001G164700--Sobic001G297900 Sobic010G246300 Sobic010G246300 Sobic001G164700--Sobic010G246300 Sobic002G055000 Sobic002G055000 Sobic001G164700--Sobic002G055000 Sobic001G480900 Sobic001G480900 Sobic001G164700--Sobic001G480900 Sobic008G030801 Sobic008G030801 Sobic001G164700--Sobic008G030801 Sobic002G266700 Sobic002G266700 Sobic001G164700--Sobic002G266700 Sobic010G011500 Sobic010G011500 Sobic001G164700--Sobic010G011500 Sobic003G089500 Sobic003G089500 Sobic001G164700--Sobic003G089500 Sobic010G090850--Sobic008G030801 Sobic010G215201 Sobic010G215201 Sobic010G090850--Sobic010G215201 Sobic010G090850--Sobic001G297900 Sobic010G090850--Sobic002G055000 Sobic010G090850--Sobic001G480900 Sobic006G049633 Sobic006G049633 Sobic010G090850--Sobic006G049633 Sobic010G090850--Sobic010G011500 Sobic001G071500 Sobic001G071500 Sobic010G090850--Sobic001G071500 Sobic004G296750 Sobic004G296750 Sobic010G090850--Sobic004G296750 Sobic001G297900--Sobic002G055000 Sobic001G297900--Sobic010G011500 Sobic001G297900--Sobic001G480900 Sobic001G297900--Sobic008G030801 Sobic001G297900--Sobic006G049633 Sobic001G297900--Sobic004G296750 Sobic001G297900--Sobic002G266700 Sobic003G229900 Sobic003G229900 Sobic001G297900--Sobic003G229900 Sobic003G281000 Sobic003G281000 Sobic001G297900--Sobic003G281000 Sobic010G206501 Sobic010G206501 Sobic010G246300--Sobic010G206501 Sobic010G246300--Sobic002G266700 Sobic008G102466 Sobic008G102466 Sobic010G246300--Sobic008G102466 Sobic002G382200 Sobic002G382200 Sobic010G246300--Sobic002G382200 Sobic002G344800 Sobic002G344800 Sobic010G246300--Sobic002G344800 Sobic010G143666 Sobic010G143666 Sobic010G246300--Sobic010G143666 Sobic002G202050 Sobic002G202050 Sobic010G246300--Sobic002G202050 Sobic002G055000--Sobic001G480900 Sobic002G055000--Sobic010G011500 Sobic002G055000--Sobic004G296750 Sobic002G055000--Sobic006G049633 Sobic002G055000--Sobic003G281000 Sobic002G055000--Sobic001G297900 Sobic002G055000--Sobic002G266700 Sobic002G055000--Sobic003G229900 Sobic002G055000--Sobic008G030801 Sobic001G480900--Sobic002G055000 Sobic001G480900--Sobic004G296750 Sobic001G480900--Sobic010G011500 Sobic001G480900--Sobic003G281000 Sobic001G480900--Sobic006G049633 Sobic001G480900--Sobic002G266700 Sobic001G480900--Sobic001G297900 Sobic001G480900--Sobic003G229900 Sobic008G061900 Sobic008G061900 Sobic001G480900--Sobic008G061900 Sobic008G030801--Sobic001G071500 Sobic008G030801--Sobic010G011500 Sobic008G030801--Sobic001G297900 Sobic008G030801--Sobic002G055000 Sobic008G030801--Sobic010G215201 Sobic008G030801--Sobic001G480900 Sobic008G030801--Sobic003G229900 Sobic008G030801--Sobic006G049633 Sobic002G054800 Sobic002G054800 Sobic008G030801--Sobic002G054800 Sobic002G266700--Sobic001G480900 Sobic002G266700--Sobic002G055000 Sobic002G266700--Sobic004G296750 Sobic002G266700--Sobic006G049633 Sobic002G266700--Sobic010G011500 Sobic002G266700--Sobic003G281000 Sobic002G266700--Sobic003G229900 Sobic002G266700--Sobic001G297900 Sobic002G266700--Sobic008G061900 Sobic010G011500--Sobic002G055000 Sobic010G011500--Sobic001G480900 Sobic010G011500--Sobic004G296750 Sobic010G011500--Sobic003G281000 Sobic010G011500--Sobic006G049633 Sobic010G011500--Sobic002G266700 Sobic010G011500--Sobic001G297900 Sobic010G011500--Sobic003G229900 Sobic010G011500--Sobic008G030801 Sobic003G089500--Sobic008G030801 Sobic003G089500--Sobic002G055000 Sobic003G089500--Sobic002G266700 Sobic003G089500--Sobic001G297900 Sobic003G089500--Sobic001G480900 Sobic003G089500--Sobic010G215201 Sobic003G089500--Sobic010G011500 Sobic003G089500--Sobic006G049633 Sobic003G089500--Sobic001G071500
Octagon: transcription factors


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