Gene annotation
| Transcriptome id | Sobic.010G092500.1 |
|---|---|
| Synonym | Sb10g008080, GSTU10, ATGSTU10 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543) glutathione S-transferase GSTU6, putative, expressed |
| UniProt | A0A194YI47 |
| Pfam | PF13417 |
| Panther DB | PTHR11260 PTHR11260:SF221 |
| NCBI CDD | KOG0406; Glutathione S-transferase |
| KEGG Orthology | K00799; GST, glutathione S-transferase |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT1G74590 : glutathione S-transferase TAU 10 |
|---|---|
| RAP-DB (Rice) | LOC_Os06g12290.1 : glutathione S-transferase GSTU6, putative, expressed |
| MaizeGDB (Corn) | Zm00025a025993 |
| Brachypodium | PNT73592 , KQK11544 , KQK11525 |
| Barley | HORVU3Hr1G107350.9 , HORVU3Hr1G107350.8 , HORVU3Hr1G107350.3 , HORVU3Hr1G107350.2 , HORVU3Hr1G107350.1 , HORVU3Hr1G107350.4 , HORVU0Hr1G019300.1 , HORVU3Hr1G111640.1 , HORVU5Hr1G010740.1 |
| Wheat | TraesCS3B02G540700 , TraesCS3D02G486200 , TraesCS3D02G485700 , TraesCS3B02G540100 , TraesCS3A02G379200 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G278200 | potassium channel AKT1, putative, expressed | - |
| 2 | Sobic.001G466450 | - | - |
| 3 | Sobic.001G466450 | - | - |
| 4 | Sobic.001G466450 | - | - |
| 5 | Sobic.001G466450 | - | - |
| 6 | Sobic.001G466450 | - | - |
| 7 | Sobic.001G466450 | - | - |
| 8 | Sobic.001G466450 | - | - |
| 9 | Sobic.003G024600 | CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 10 | Sobic.002G132500 | - | - |
| 11 | Sobic.001G373600 | Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 12 | Sobic.007G164500 | - | - |
| 13 | Sobic.001G323600 | transporter family protein, putative, expressed | - |
| 14 | Sobic.002G097000 | expressed protein | - |
| 15 | Sobic.009G046200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed | - |
| 16 | Sobic.005G088700 | expressed protein | - |
| 17 | Sobic.009G015500 | - | - |
| 18 | Sobic.003G011400 | similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed | - |
| 19 | Sobic.004G308300 | xyloglucan fucosyltransferase, putative, expressed | K13681: xyloglucan fucosyltransferase |
| 20 | Sobic.003G367650 | -(PubMedID : 26976818) | - |
Gene co-expression network
Octagon: transcription factors
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