Gene annotation
Transcriptome id Sobic.003G367650.1
Synonym PPa3
Functional annotation - (PubMedID : 26976818)
UniProt A0A1W0W0L0
Pfam PF00719
Panther DB PTHR10286 PTHR10286:SF10
NCBI CDD KOG1626; Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38
KEGG Orthology -
Gene Ontology GO:0006796; phosphate-containing compound metabolic process GO:0005737cytoplasm GO:0004427inorganic diphosphatase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT2G46860 : pyrophosphorylase 3
RAP-DB (Rice) LOC_Os01g64670.2 : soluble inorganic pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a037292
Brachypodium KQK06046
Barley HORVU7Hr1G085380.1 , HORVU7Hr1G085380.2 , HORVU1Hr1G075110.8 , HORVU1Hr1G075110.1 , HORVU1Hr1G075110.3 , HORVU1Hr1G075110.2 , HORVU1Hr1G075110.5 , HORVU1Hr1G075110.4 , HORVU1Hr1G075110.7 , HORVU1Hr1G075110.6
Wheat TraesCS1B02G049200 , TraesCS1B02G283300 , TraesCS1A02G273500 , TraesCS1D02G273500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G160300 - -
2 Sobic.009G192200 outer membrane protein, OMP85 family, putative, expressed -
3 Sobic.002G390200 pentatricopeptide, putative, expressed -
4 Sobic.007G085900 - -
5 Sobic.008G140050 - -
6 Sobic.003G160433 - -
7 Sobic.003G169000 - K02718: photosystem II PsbT protein
8 Sobic.005G096450 - -
9 Sobic.003G330350 - -
10 Sobic.003G352000 growth regulator related protein, putative, expressed -
11 Sobic.007G137501 - -
12 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
13 Sobic.001G098700 GRAM domain containing protein, expressed -
14 Sobic.006G057100 - -
15 Sobic.003G050100 polygalacturonase, putative, expressed -
16 Sobic.003G218950 - -
17 Sobic.004G282933 - -
18 Sobic.005G116400 apocytochrome f precursor, putative, expressed K02634: apocytochrome f
19 Sobic.010G225400 expressed protein -
20 Sobic.K029400 conserved hypothetical protein -


Gene co-expression network
sample Sobic003G367650 Sobic003G367650 Sobic003G160300 Sobic003G160300 Sobic003G367650--Sobic003G160300 Sobic009G192200 Sobic009G192200 Sobic003G367650--Sobic009G192200 Sobic002G390200 Sobic002G390200 Sobic003G367650--Sobic002G390200 Sobic007G085900 Sobic007G085900 Sobic003G367650--Sobic007G085900 Sobic008G140050 Sobic008G140050 Sobic003G367650--Sobic008G140050 Sobic003G160433 Sobic003G160433 Sobic003G367650--Sobic003G160433 Sobic003G169000 Sobic003G169000 Sobic003G367650--Sobic003G169000 Sobic005G096450 Sobic005G096450 Sobic003G367650--Sobic005G096450 Sobic003G330350 Sobic003G330350 Sobic003G367650--Sobic003G330350 Sobic003G160300--Sobic003G160433 Sobic003G160300--Sobic002G390200 Sobic003G160300--Sobic007G085900 Sobic003G160400 Sobic003G160400 Sobic003G160300--Sobic003G160400 Sobic003G160300--Sobic008G140050 Sobic005G216900 Sobic005G216900 Sobic003G160300--Sobic005G216900 Sobic001G128000 Sobic001G128000 Sobic003G160300--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic003G160300--Sobic002G180732 Sobic001G054050 Sobic001G054050 Sobic003G160300--Sobic001G054050 Sobic009G192200--Sobic007G085900 Sobic006G057100 Sobic006G057100 Sobic009G192200--Sobic006G057100 Sobic009G192200--Sobic003G160300 Sobic004G282933 Sobic004G282933 Sobic009G192200--Sobic004G282933 Sobic009G192200--Sobic008G140050 Sobic003G218950 Sobic003G218950 Sobic009G192200--Sobic003G218950 Sobic009G192200--Sobic003G160433 Sobic006G131700 Sobic006G131700 Sobic009G192200--Sobic006G131700 Sobic003G352000 Sobic003G352000 Sobic009G192200--Sobic003G352000 Sobic002G390200--Sobic003G160300 Sobic002G390200--Sobic003G160433 Sobic002G390200--Sobic002G180732 Sobic002G390200--Sobic007G085900 Sobic002G390200--Sobic003G160400 Sobic006G139200 Sobic006G139200 Sobic002G390200--Sobic006G139200 Sobic002G390200--Sobic008G140050 Sobic002G040550 Sobic002G040550 Sobic002G390200--Sobic002G040550 Sobic003G172450 Sobic003G172450 Sobic002G390200--Sobic003G172450 Sobic007G085900--Sobic003G160300 Sobic007G085900--Sobic003G160433 Sobic007G085900--Sobic009G192200 Sobic007G085900--Sobic003G160400 Sobic007G085900--Sobic008G140050 Sobic007G085900--Sobic006G057100 Sobic007G085900--Sobic001G128000 Sobic007G085900--Sobic002G390200 Sobic007G085900--Sobic001G054050 Sobic008G140050--Sobic007G085900 Sobic008G140050--Sobic003G160300 Sobic008G140050--Sobic003G160400 Sobic005G167100 Sobic005G167100 Sobic008G140050--Sobic005G167100 Sobic008G140050--Sobic003G352000 Sobic010G225400 Sobic010G225400 Sobic008G140050--Sobic010G225400 Sobic008G140050--Sobic002G390200 SobicK029400 SobicK029400 Sobic008G140050--SobicK029400 Sobic008G140050--Sobic009G192200 Sobic003G160433--Sobic003G160300 Sobic003G160433--Sobic002G390200 Sobic003G160433--Sobic007G085900 Sobic003G160433--Sobic001G128000 Sobic003G160433--Sobic005G216900 Sobic003G160433--Sobic002G180732 Sobic003G160433--Sobic003G160400 Sobic003G160433--Sobic001G054050 Sobic003G160433--Sobic008G140050 Sobic003G169100 Sobic003G169100 Sobic003G169000--Sobic003G169100 Sobic007G065000 Sobic007G065000 Sobic003G169000--Sobic007G065000 Sobic007G149200 Sobic007G149200 Sobic003G169000--Sobic007G149200 Sobic003G169000--Sobic003G352000 Sobic003G369533 Sobic003G369533 Sobic003G169000--Sobic003G369533 Sobic003G168200 Sobic003G168200 Sobic003G169000--Sobic003G168200 Sobic003G169000--SobicK029400 Sobic007G145801 Sobic007G145801 Sobic003G169000--Sobic007G145801 Sobic003G169000--Sobic003G218950 Sobic005G116400 Sobic005G116400 Sobic005G096450--Sobic005G116400 Sobic005G096450--Sobic007G149200 Sobic007G137501 Sobic007G137501 Sobic005G096450--Sobic007G137501 Sobic010G201266 Sobic010G201266 Sobic005G096450--Sobic010G201266 Sobic002G278100 Sobic002G278100 Sobic005G096450--Sobic002G278100 Sobic007G141650 Sobic007G141650 Sobic005G096450--Sobic007G141650 Sobic005G096450--Sobic003G168200 Sobic005G096450--Sobic010G225400 Sobic005G096450--Sobic003G369533 Sobic001G270800 Sobic001G270800 Sobic003G330350--Sobic001G270800 Sobic003G050100 Sobic003G050100 Sobic003G330350--Sobic003G050100 Sobic003G330350--Sobic006G131700 Sobic003G330350--Sobic003G218950 Sobic001G098700 Sobic001G098700 Sobic003G330350--Sobic001G098700 Sobic004G091900 Sobic004G091900 Sobic003G330350--Sobic004G091900 Sobic003G330350--Sobic006G057100 Sobic003G330350--Sobic009G192200 Sobic001G167000 Sobic001G167000 Sobic003G330350--Sobic001G167000
Octagon: transcription factors


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