Gene annotation
Transcriptome id Sobic.010G211000.2,Sobic.010G211000.3
Synonym Sb10g025770, BEN1
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt A0A194YKM0
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF363
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G45400 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os06g44180.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005435
Brachypodium KQK15373 , KQK16849
Barley HORVU7Hr1G030830.1
Wheat TraesCS2D02G181300 , TraesCS7D02G152300 , TraesCS7B02G412700 , TraesCS7A02G505200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G204000 transferase family protein, putative, expressed -
2 Sobic.010G123000 - -
3 Sobic.005G217500 cytochrome P450, putative, expressed -
4 Sobic.009G247601 - -
5 Sobic.005G035400 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G156600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsMADS93 - MADS-box family gene with M-beta type-box, expressed -
7 Sobic.007G175500 expressed protein -
8 Sobic.002G028901 - -
9 Sobic.008G191800 B3 DNA binding domain containing protein, expressed -
10 Sobic.001G461101 - -
11 Sobic.007G121800 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
12 Sobic.005G096866 - -
13 Sobic.001G100650 - -
14 Sobic.010G064050 - -
15 Sobic.005G080075 - -
16 Sobic.002G082350 - -
17 Sobic.003G008400 acetyltransferase, GNAT family protein, expressed -
18 Sobic.003G254400 expressed protein -
19 Sobic.001G413400 matrix attachment region binding protein, putative, expressed -
20 Sobic.009G073200 expressed protein -


Gene co-expression network
sample Sobic010G211000 Sobic010G211000 Sobic010G204000 Sobic010G204000 Sobic010G211000--Sobic010G204000 Sobic010G123000 Sobic010G123000 Sobic010G211000--Sobic010G123000 Sobic005G217500 Sobic005G217500 Sobic010G211000--Sobic005G217500 Sobic009G247601 Sobic009G247601 Sobic010G211000--Sobic009G247601 Sobic005G035400 Sobic005G035400 Sobic010G211000--Sobic005G035400 Sobic003G156600 Sobic003G156600 Sobic010G211000--Sobic003G156600 Sobic007G175500 Sobic007G175500 Sobic010G211000--Sobic007G175500 Sobic002G028901 Sobic002G028901 Sobic010G211000--Sobic002G028901 Sobic008G191800 Sobic008G191800 Sobic010G211000--Sobic008G191800 Sobic006G167850 Sobic006G167850 Sobic010G204000--Sobic006G167850 Sobic006G223700 Sobic006G223700 Sobic010G204000--Sobic006G223700 Sobic010G204000--Sobic010G123000 Sobic008G154200 Sobic008G154200 Sobic010G204000--Sobic008G154200 Sobic003G126700 Sobic003G126700 Sobic010G204000--Sobic003G126700 Sobic004G286450 Sobic004G286450 Sobic010G204000--Sobic004G286450 Sobic003G064000 Sobic003G064000 Sobic010G204000--Sobic003G064000 Sobic003G372950 Sobic003G372950 Sobic010G204000--Sobic003G372950 Sobic002G269800 Sobic002G269800 Sobic010G204000--Sobic002G269800 Sobic005G080075 Sobic005G080075 Sobic010G123000--Sobic005G080075 Sobic001G100650 Sobic001G100650 Sobic010G123000--Sobic001G100650 Sobic010G064050 Sobic010G064050 Sobic010G123000--Sobic010G064050 Sobic003G008400 Sobic003G008400 Sobic010G123000--Sobic003G008400 Sobic002G082350 Sobic002G082350 Sobic010G123000--Sobic002G082350 Sobic003G254400 Sobic003G254400 Sobic010G123000--Sobic003G254400 Sobic009G073200 Sobic009G073200 Sobic010G123000--Sobic009G073200 Sobic003G318600 Sobic003G318600 Sobic010G123000--Sobic003G318600 Sobic003G360500 Sobic003G360500 Sobic010G123000--Sobic003G360500 Sobic005G217500--Sobic009G247601 Sobic005G217500--Sobic006G167850 Sobic005G017566 Sobic005G017566 Sobic005G217500--Sobic005G017566 Sobic005G096866 Sobic005G096866 Sobic005G217500--Sobic005G096866 Sobic001G386500 Sobic001G386500 Sobic005G217500--Sobic001G386500 Sobic005G217500--Sobic010G204000 Sobic003G088300 Sobic003G088300 Sobic005G217500--Sobic003G088300 Sobic005G217500--Sobic008G191800 Sobic003G427550 Sobic003G427550 Sobic005G217500--Sobic003G427550 Sobic007G145300 Sobic007G145300 Sobic009G247601--Sobic007G145300 Sobic009G197350 Sobic009G197350 Sobic009G247601--Sobic009G197350 Sobic009G156700 Sobic009G156700 Sobic009G247601--Sobic009G156700 Sobic007G003300 Sobic007G003300 Sobic009G247601--Sobic007G003300 Sobic009G247601--Sobic008G191800 Sobic009G247601--Sobic002G269800 Sobic009G247601--Sobic003G126700 Sobic002G124766 Sobic002G124766 Sobic009G247601--Sobic002G124766 Sobic009G247601--Sobic006G223700 Sobic010G165925 Sobic010G165925 Sobic005G035400--Sobic010G165925 Sobic010G263151 Sobic010G263151 Sobic005G035400--Sobic010G263151 Sobic006G196800 Sobic006G196800 Sobic005G035400--Sobic006G196800 Sobic007G003250 Sobic007G003250 Sobic005G035400--Sobic007G003250 Sobic001G369701 Sobic001G369701 Sobic005G035400--Sobic001G369701 Sobic003G188700 Sobic003G188700 Sobic005G035400--Sobic003G188700 Sobic002G142550 Sobic002G142550 Sobic005G035400--Sobic002G142550 Sobic005G107250 Sobic005G107250 Sobic005G035400--Sobic005G107250 Sobic006G007700 Sobic006G007700 Sobic005G035400--Sobic006G007700 Sobic003G156600--Sobic010G123000 Sobic003G156600--Sobic003G008400 Sobic003G156600--Sobic005G080075 Sobic003G156600--Sobic001G100650 Sobic003G156600--Sobic010G064050 Sobic003G156600--Sobic009G073200 Sobic003G156600--Sobic003G254400 Sobic001G413400 Sobic001G413400 Sobic003G156600--Sobic001G413400 Sobic003G156600--Sobic002G082350 Sobic001G250150 Sobic001G250150 Sobic007G175500--Sobic001G250150 Sobic010G137500 Sobic010G137500 Sobic007G175500--Sobic010G137500 Sobic007G175500--Sobic005G035400 Sobic007G175500--Sobic005G107250 Sobic007G175500--Sobic010G165925 Sobic007G175500--Sobic002G142550 Sobic010G180300 Sobic010G180300 Sobic007G175500--Sobic010G180300 Sobic007G175500--Sobic001G369701 Sobic010G079150 Sobic010G079150 Sobic007G175500--Sobic010G079150 Sobic002G028901--Sobic005G035400 Sobic007G191150 Sobic007G191150 Sobic002G028901--Sobic007G191150 Sobic004G147300 Sobic004G147300 Sobic002G028901--Sobic004G147300 Sobic009G064700 Sobic009G064700 Sobic002G028901--Sobic009G064700 Sobic001G495550 Sobic001G495550 Sobic002G028901--Sobic001G495550 Sobic007G121800 Sobic007G121800 Sobic002G028901--Sobic007G121800 Sobic003G333300 Sobic003G333300 Sobic002G028901--Sobic003G333300 Sobic006G089601 Sobic006G089601 Sobic002G028901--Sobic006G089601 Sobic002G028901--Sobic010G263151 Sobic008G191800--Sobic002G082350 Sobic008G191800--Sobic010G064050 Sobic008G191800--Sobic001G100650 Sobic008G191800--Sobic005G080075 Sobic008G191800--Sobic003G008400 Sobic008G191800--Sobic009G073200 Sobic008G191800--Sobic003G360500 Sobic008G191800--Sobic003G254400 Sobic008G191800--Sobic003G318600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.