Gene annotation
Transcriptome id Sobic.010G227900.1
Synonym
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt A0A194YLZ9
Pfam -
Panther DB PTHR23284 PTHR23284:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g09000.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008595
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
3 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.009G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
5 Sobic.009G256100 expressed protein -
6 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
7 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
8 Sobic.004G112100 -(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsRhmbd6 - Putative Rhomboid homologue, expressed -
9 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
10 Sobic.007G006400 - -
11 Sobic.004G059800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsHKT1@3 - Na+ transporter, expressed -
12 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
13 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.001G446100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
16 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
18 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic010G227900 Sobic010G227900 Sobic001G540300 Sobic001G540300 Sobic010G227900--Sobic001G540300 Sobic010G104800 Sobic010G104800 Sobic010G227900--Sobic010G104800 Sobic001G073300 Sobic001G073300 Sobic010G227900--Sobic001G073300 Sobic009G048900 Sobic009G048900 Sobic010G227900--Sobic009G048900 Sobic009G256100 Sobic009G256100 Sobic010G227900--Sobic009G256100 Sobic002G390100 Sobic002G390100 Sobic010G227900--Sobic002G390100 Sobic004G215800 Sobic004G215800 Sobic010G227900--Sobic004G215800 Sobic004G112100 Sobic004G112100 Sobic010G227900--Sobic004G112100 Sobic006G153400 Sobic006G153400 Sobic010G227900--Sobic006G153400 Sobic001G540300--Sobic009G048900 Sobic008G140200 Sobic008G140200 Sobic001G540300--Sobic008G140200 Sobic001G540300--Sobic004G112100 Sobic001G540300--Sobic010G104800 Sobic001G446100 Sobic001G446100 Sobic001G540300--Sobic001G446100 Sobic001G540300--Sobic009G256100 Sobic001G540300--Sobic001G073300 Sobic001G540300--Sobic004G215800 Sobic010G039500 Sobic010G039500 Sobic001G540300--Sobic010G039500 Sobic010G104800--Sobic001G073300 Sobic010G104800--Sobic006G153400 Sobic010G104800--Sobic009G256100 Sobic007G006400 Sobic007G006400 Sobic010G104800--Sobic007G006400 Sobic008G129900 Sobic008G129900 Sobic010G104800--Sobic008G129900 Sobic010G104800--Sobic004G112100 Sobic001G244600 Sobic001G244600 Sobic010G104800--Sobic001G244600 Sobic006G161500 Sobic006G161500 Sobic010G104800--Sobic006G161500 Sobic010G104800--Sobic002G390100 Sobic001G073300--Sobic010G104800 Sobic001G073300--Sobic006G161500 Sobic001G073300--Sobic009G256100 Sobic001G073300--Sobic001G244600 Sobic003G409700 Sobic003G409700 Sobic001G073300--Sobic003G409700 Sobic001G073300--Sobic002G390100 Sobic010G231300 Sobic010G231300 Sobic001G073300--Sobic010G231300 Sobic003G042900 Sobic003G042900 Sobic001G073300--Sobic003G042900 Sobic001G073300--Sobic008G129900 Sobic009G048900--Sobic004G112100 Sobic006G244000 Sobic006G244000 Sobic009G048900--Sobic006G244000 Sobic009G048900--Sobic006G153400 Sobic009G048900--Sobic010G104800 Sobic006G057866 Sobic006G057866 Sobic009G048900--Sobic006G057866 Sobic009G048900--Sobic001G446100 Sobic003G127800 Sobic003G127800 Sobic009G048900--Sobic003G127800 Sobic009G048900--Sobic004G215800 Sobic009G048900--Sobic001G540300 Sobic009G256100--Sobic010G104800 Sobic009G256100--Sobic006G153400 Sobic009G256100--Sobic002G390100 Sobic007G058100 Sobic007G058100 Sobic009G256100--Sobic007G058100 Sobic007G105500 Sobic007G105500 Sobic009G256100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic009G256100--Sobic002G404800 Sobic003G185900 Sobic003G185900 Sobic009G256100--Sobic003G185900 Sobic009G256100--Sobic004G215800 Sobic009G256100--Sobic008G129900 Sobic003G036200 Sobic003G036200 Sobic002G390100--Sobic003G036200 Sobic002G390100--Sobic002G404800 Sobic002G390100--Sobic009G256100 Sobic005G068700 Sobic005G068700 Sobic002G390100--Sobic005G068700 Sobic002G390100--Sobic004G215800 Sobic002G390100--Sobic007G105500 Sobic002G390100--Sobic003G042900 Sobic002G390100--Sobic010G104800 Sobic002G390100--Sobic001G073300 Sobic004G215800--Sobic007G105500 Sobic004G215800--Sobic003G036200 Sobic004G215800--Sobic003G185900 Sobic003G367500 Sobic003G367500 Sobic004G215800--Sobic003G367500 Sobic004G215800--Sobic002G404800 Sobic008G033000 Sobic008G033000 Sobic004G215800--Sobic008G033000 Sobic004G215800--Sobic009G256100 Sobic003G097600 Sobic003G097600 Sobic004G215800--Sobic003G097600 Sobic004G215800--Sobic004G112100 Sobic004G112100--Sobic006G153400 Sobic004G112100--Sobic009G048900 Sobic004G112100--Sobic010G104800 Sobic004G112100--Sobic004G215800 Sobic004G112100--Sobic009G256100 Sobic004G112100--Sobic003G097600 Sobic004G112100--Sobic002G404800 Sobic004G112100--Sobic007G006400 Sobic004G027600 Sobic004G027600 Sobic004G112100--Sobic004G027600 Sobic006G153400--Sobic010G104800 Sobic006G153400--Sobic009G256100 Sobic006G153400--Sobic007G006400 Sobic006G153400--Sobic004G112100 Sobic006G153400--Sobic003G127800 Sobic006G153400--Sobic001G244600 Sobic004G082300 Sobic004G082300 Sobic006G153400--Sobic004G082300 Sobic004G059800 Sobic004G059800 Sobic006G153400--Sobic004G059800 Sobic005G101200 Sobic005G101200 Sobic006G153400--Sobic005G101200
Octagon: transcription factors


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