Gene annotation
Transcriptome id Sobic.001G185450.1
Synonym -
Functional annotation -
UniProt A0A1Z5S698
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G101700 dirigent, putative, expressed -
2 Sobic.006G010100 terpene synthase, putative, expressed -
3 Sobic.001G330200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS3-12 - C2H2 zinc finger protein, expressed -
4 Sobic.002G251000 expressed protein -
5 Sobic.005G101600 dirigent, putative, expressed -
6 Sobic.002G139400 AP2 domain containing protein, expressed -
7 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
8 Sobic.001G330100 ZOS3-12 - C2H2 zinc finger protein, expressed -
9 Sobic.001G318600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
11 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
12 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.003G282901 - -
15 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.004G148000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.002G263400 expressed protein -
18 Sobic.004G148200 Cupin domain containing protein, expressed -
19 Sobic.004G245700 expressed protein -
20 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G185450 Sobic001G185450 Sobic005G101700 Sobic005G101700 Sobic001G185450--Sobic005G101700 Sobic006G010100 Sobic006G010100 Sobic001G185450--Sobic006G010100 Sobic001G330200 Sobic001G330200 Sobic001G185450--Sobic001G330200 Sobic002G251000 Sobic002G251000 Sobic001G185450--Sobic002G251000 Sobic005G101600 Sobic005G101600 Sobic001G185450--Sobic005G101600 Sobic002G139400 Sobic002G139400 Sobic001G185450--Sobic002G139400 Sobic001G330400 Sobic001G330400 Sobic001G185450--Sobic001G330400 Sobic001G330100 Sobic001G330100 Sobic001G185450--Sobic001G330100 Sobic001G318600 Sobic001G318600 Sobic001G185450--Sobic001G318600 Sobic005G101700--Sobic005G101600 Sobic005G101700--Sobic001G318600 Sobic003G200700 Sobic003G200700 Sobic005G101700--Sobic003G200700 Sobic007G227300 Sobic007G227300 Sobic005G101700--Sobic007G227300 Sobic005G101800 Sobic005G101800 Sobic005G101700--Sobic005G101800 Sobic001G400800 Sobic001G400800 Sobic005G101700--Sobic001G400800 Sobic010G084400 Sobic010G084400 Sobic005G101700--Sobic010G084400 Sobic010G117900 Sobic010G117900 Sobic005G101700--Sobic010G117900 Sobic004G148200 Sobic004G148200 Sobic005G101700--Sobic004G148200 Sobic006G235000 Sobic006G235000 Sobic006G010100--Sobic006G235000 Sobic006G010100--Sobic001G185450 Sobic002G063800 Sobic002G063800 Sobic006G010100--Sobic002G063800 Sobic004G245700 Sobic004G245700 Sobic006G010100--Sobic004G245700 Sobic009G145600 Sobic009G145600 Sobic006G010100--Sobic009G145600 Sobic010G062300 Sobic010G062300 Sobic006G010100--Sobic010G062300 Sobic003G043500 Sobic003G043500 Sobic006G010100--Sobic003G043500 Sobic009G145500 Sobic009G145500 Sobic006G010100--Sobic009G145500 Sobic004G315200 Sobic004G315200 Sobic006G010100--Sobic004G315200 Sobic001G330200--Sobic001G330100 Sobic009G144700 Sobic009G144700 Sobic001G330200--Sobic009G144700 Sobic001G363400 Sobic001G363400 Sobic001G330200--Sobic001G363400 Sobic001G330200--Sobic001G330400 Sobic002G388900 Sobic002G388900 Sobic001G330200--Sobic002G388900 Sobic004G294400 Sobic004G294400 Sobic001G330200--Sobic004G294400 Sobic002G395300 Sobic002G395300 Sobic001G330200--Sobic002G395300 Sobic004G219800 Sobic004G219800 Sobic001G330200--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic001G330200--Sobic009G032000 Sobic004G243100 Sobic004G243100 Sobic002G251000--Sobic004G243100 Sobic001G318700 Sobic001G318700 Sobic002G251000--Sobic001G318700 Sobic001G423800 Sobic001G423800 Sobic002G251000--Sobic001G423800 Sobic001G231400 Sobic001G231400 Sobic002G251000--Sobic001G231400 Sobic001G018300 Sobic001G018300 Sobic002G251000--Sobic001G018300 Sobic001G192200 Sobic001G192200 Sobic002G251000--Sobic001G192200 Sobic003G282901 Sobic003G282901 Sobic002G251000--Sobic003G282901 Sobic002G140400 Sobic002G140400 Sobic002G251000--Sobic002G140400 Sobic004G189400 Sobic004G189400 Sobic002G251000--Sobic004G189400 Sobic005G101600--Sobic005G101700 Sobic005G101600--Sobic001G318600 Sobic005G101600--Sobic001G400800 Sobic005G101600--Sobic007G227300 Sobic005G206601 Sobic005G206601 Sobic005G101600--Sobic005G206601 Sobic005G101600--Sobic005G101800 Sobic005G101600--Sobic010G084400 Sobic003G437100 Sobic003G437100 Sobic005G101600--Sobic003G437100 Sobic005G101600--Sobic003G200700 Sobic002G139400--Sobic004G243100 Sobic009G224100 Sobic009G224100 Sobic002G139400--Sobic009G224100 Sobic002G184200 Sobic002G184200 Sobic002G139400--Sobic002G184200 Sobic002G139400--Sobic001G192200 Sobic002G139400--Sobic001G231400 Sobic002G139400--Sobic002G251000 Sobic002G139400--Sobic003G282901 Sobic002G139400--Sobic001G018300 Sobic002G139400--Sobic001G423800 Sobic003G268600 Sobic003G268600 Sobic001G330400--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic001G330400--Sobic006G075400 Sobic001G330400--Sobic004G219800 Sobic007G017500 Sobic007G017500 Sobic001G330400--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic001G330400--Sobic009G122400 Sobic001G330400--Sobic004G294400 Sobic001G330400--Sobic001G318700 Sobic002G220000 Sobic002G220000 Sobic001G330400--Sobic002G220000 Sobic001G330400--Sobic001G330100 Sobic001G330100--Sobic001G330200 Sobic001G330100--Sobic009G144700 Sobic001G330100--Sobic002G388900 Sobic001G256700 Sobic001G256700 Sobic001G330100--Sobic001G256700 Sobic001G330100--Sobic004G219800 Sobic001G330100--Sobic002G395300 Sobic004G108200 Sobic004G108200 Sobic001G330100--Sobic004G108200 Sobic004G352000 Sobic004G352000 Sobic001G330100--Sobic004G352000 Sobic001G330100--Sobic004G294400 Sobic001G318600--Sobic005G101700 Sobic001G318600--Sobic005G101600 Sobic006G268800 Sobic006G268800 Sobic001G318600--Sobic006G268800 Sobic001G318600--Sobic007G227300 Sobic001G318600--Sobic003G200700 Sobic001G318600--Sobic004G148200 Sobic001G318600--Sobic001G400800 Sobic001G318600--Sobic010G084400 Sobic010G084100 Sobic010G084100 Sobic001G318600--Sobic010G084100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.