Gene annotation
Transcriptome id Sobic.001G256600.2
Synonym Sb01g023030
Functional annotation GRF zinc finger family protein, expressed
UniProt A0A1Z5S7X8
Pfam -
Panther DB PTHR33248 PTHR33248:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g41640.1 : GRF zinc finger family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G210250 - -
2 Sobic.001G075950 - -
3 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
4 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
5 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
6 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
7 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
8 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
9 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
10 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
11 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
12 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
13 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
14 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
15 Sobic.005G215766 - -
16 Sobic.006G272700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
17 Sobic.001G027800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
18 Sobic.010G253500 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
19 Sobic.001G164100 cytochrome P450, putative, expressed -
20 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -


Gene co-expression network
sample Sobic001G256600 Sobic001G256600 Sobic001G210250 Sobic001G210250 Sobic001G256600--Sobic001G210250 Sobic001G075950 Sobic001G075950 Sobic001G256600--Sobic001G075950 Sobic001G210200 Sobic001G210200 Sobic001G256600--Sobic001G210200 Sobic010G253500 Sobic010G253500 Sobic001G210250--Sobic010G253500 Sobic001G210250--Sobic001G210200 Sobic009G150100 Sobic009G150100 Sobic001G075950--Sobic009G150100 Sobic001G322766 Sobic001G322766 Sobic001G075950--Sobic001G322766 Sobic004G289700 Sobic004G289700 Sobic001G075950--Sobic004G289700 Sobic007G100275 Sobic007G100275 Sobic001G075950--Sobic007G100275 Sobic001G075950--Sobic001G256600 Sobic010G233300 Sobic010G233300 Sobic001G075950--Sobic010G233300 Sobic003G261700 Sobic003G261700 Sobic001G075950--Sobic003G261700 Sobic003G091100 Sobic003G091100 Sobic001G075950--Sobic003G091100 Sobic009G066850 Sobic009G066850 Sobic001G075950--Sobic009G066850 Sobic001G210200--Sobic001G210200
Octagon: transcription factors


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