Gene annotation
Transcriptome id Sobic.001G324100.2
Synonym Sb01g031410
Functional annotation leucoanthocyanidin dioxygenase, putative, expressed
UniProt A0A1Z5S8Z6
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF158
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G17020 : senescence-related gene 1
RAP-DB (Rice) LOC_Os03g32470.1 : leucoanthocyanidin dioxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a003053 , Zm00025a003054
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G324100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G365550 - -
2 Sobic.003G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
3 Sobic.002G404100 annexin, putative, expressed -
4 Sobic.007G015200 cytochrome P450, putative, expressed -
5 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.010G212500 - -
7 Sobic.002G365801 - -
8 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
9 Sobic.003G240400 leaf senescence related protein, putative, expressed -
10 Sobic.007G073000 - -
11 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G234400 O-methyltransferase, putative, expressed -
13 Sobic.002G311501 - -
14 Sobic.004G283900 cytochrome P450, putative, expressed -
15 Sobic.008G019900 - -
16 Sobic.003G322100 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
17 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
18 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -
19 Sobic.003G337600 WRKY116, expressed -
20 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G324100 Sobic001G324100 Sobic002G365550 Sobic002G365550 Sobic001G324100--Sobic002G365550 Sobic003G228700 Sobic003G228700 Sobic001G324100--Sobic003G228700 Sobic002G404100 Sobic002G404100 Sobic001G324100--Sobic002G404100 Sobic007G015200 Sobic007G015200 Sobic001G324100--Sobic007G015200 Sobic001G379400 Sobic001G379400 Sobic001G324100--Sobic001G379400 Sobic010G212500 Sobic010G212500 Sobic001G324100--Sobic010G212500 Sobic002G365801 Sobic002G365801 Sobic001G324100--Sobic002G365801 Sobic002G365600 Sobic002G365600 Sobic001G324100--Sobic002G365600 Sobic003G240400 Sobic003G240400 Sobic001G324100--Sobic003G240400 Sobic002G365550--Sobic002G365801 Sobic002G365550--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic002G365550--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic002G365550--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365550--Sobic010G115700 Sobic002G365550--Sobic010G212500 Sobic010G096400 Sobic010G096400 Sobic002G365550--Sobic010G096400 Sobic002G368300 Sobic002G368300 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic003G322100 Sobic003G322100 Sobic003G228700--Sobic003G322100 Sobic003G228700--Sobic002G365550 Sobic003G228700--Sobic007G015200 Sobic005G177400 Sobic005G177400 Sobic003G228700--Sobic005G177400 Sobic007G073000 Sobic007G073000 Sobic003G228700--Sobic007G073000 Sobic003G228700--Sobic001G379400 Sobic001G455100 Sobic001G455100 Sobic003G228700--Sobic001G455100 Sobic003G228700--Sobic002G404100 Sobic003G228700--Sobic002G365801 Sobic006G028500 Sobic006G028500 Sobic002G404100--Sobic006G028500 Sobic002G216100 Sobic002G216100 Sobic002G404100--Sobic002G216100 Sobic010G148800 Sobic010G148800 Sobic002G404100--Sobic010G148800 Sobic002G404100--Sobic003G240400 Sobic001G360500 Sobic001G360500 Sobic002G404100--Sobic001G360500 Sobic005G065900 Sobic005G065900 Sobic002G404100--Sobic005G065900 Sobic004G348800 Sobic004G348800 Sobic002G404100--Sobic004G348800 Sobic004G322800 Sobic004G322800 Sobic002G404100--Sobic004G322800 Sobic010G082000 Sobic010G082000 Sobic002G404100--Sobic010G082000 Sobic007G170300 Sobic007G170300 Sobic007G015200--Sobic007G170300 Sobic004G009400 Sobic004G009400 Sobic007G015200--Sobic004G009400 Sobic007G015200--Sobic007G073000 Sobic002G101400 Sobic002G101400 Sobic007G015200--Sobic002G101400 Sobic002G195600 Sobic002G195600 Sobic007G015200--Sobic002G195600 Sobic003G053600 Sobic003G053600 Sobic007G015200--Sobic003G053600 Sobic007G015200--Sobic001G360500 Sobic003G203600 Sobic003G203600 Sobic007G015200--Sobic003G203600 Sobic007G015200--Sobic003G228700 Sobic006G089000 Sobic006G089000 Sobic001G379400--Sobic006G089000 Sobic010G147200 Sobic010G147200 Sobic001G379400--Sobic010G147200 Sobic005G160700 Sobic005G160700 Sobic001G379400--Sobic005G160700 Sobic006G277700 Sobic006G277700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G234900 Sobic001G234900 Sobic001G379400--Sobic001G234900 Sobic003G337600 Sobic003G337600 Sobic001G379400--Sobic003G337600 Sobic006G174300 Sobic006G174300 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100 Sobic002G261500 Sobic002G261500 Sobic010G212500--Sobic002G261500 Sobic010G212500--Sobic004G348800 Sobic010G212500--Sobic002G365801 Sobic010G212500--Sobic002G365550 Sobic001G395800 Sobic001G395800 Sobic010G212500--Sobic001G395800 Sobic003G119500 Sobic003G119500 Sobic010G212500--Sobic003G119500 Sobic010G212500--Sobic003G053400 Sobic003G311800 Sobic003G311800 Sobic010G212500--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G212500--Sobic009G109000 Sobic002G365801--Sobic002G365550 Sobic002G365801--Sobic004G071000 Sobic002G365801--Sobic010G115700 Sobic002G365801--Sobic010G212500 Sobic002G365801--Sobic002G368300 Sobic002G365801--Sobic002G365500 Sobic002G365801--Sobic010G096400 Sobic002G365801--Sobic001G379400 Sobic009G088900 Sobic009G088900 Sobic002G365801--Sobic009G088900 Sobic002G365600--Sobic002G365550 Sobic003G269500 Sobic003G269500 Sobic002G365600--Sobic003G269500 Sobic002G365600--Sobic002G365500 Sobic008G172500 Sobic008G172500 Sobic002G365600--Sobic008G172500 Sobic006G183900 Sobic006G183900 Sobic002G365600--Sobic006G183900 Sobic002G365600--Sobic004G071000 Sobic002G365600--Sobic002G365801 Sobic001G364400 Sobic001G364400 Sobic002G365600--Sobic001G364400 Sobic002G365600--Sobic010G212500 Sobic003G240400--Sobic010G082000 Sobic003G215300 Sobic003G215300 Sobic003G240400--Sobic003G215300 Sobic001G263300 Sobic001G263300 Sobic003G240400--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic003G240400--Sobic006G196400 Sobic007G090600 Sobic007G090600 Sobic003G240400--Sobic007G090600 Sobic010G152400 Sobic010G152400 Sobic003G240400--Sobic010G152400 Sobic003G240400--Sobic006G028500 Sobic003G000100 Sobic003G000100 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800
Octagon: transcription factors


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