Gene annotation
| Transcriptome id |
Sobic.001G453150.1 |
| Synonym |
- |
| Functional annotation |
- |
| UniProt |
A0A1Z5SB00 |
| Pfam |
- |
| Panther DB |
PTHR21091
PTHR21091:SF6 |
| NCBI CDD |
- |
| KEGG Orthology |
- |
| Gene Ontology |
- |
Orthologs (automatic annotation)
| TAIR |
AT3G22740 : homocysteine S-methyltransferase 3 |
| RAP-DB (Rice) |
LOC_Os03g12110.1 : homocysteine S-methyltransferase protein, putative, expressed |
| MaizeGDB (Corn) |
Zm00025a053040 |
| Brachypodium |
PNT77855
, KQK22843 |
| Barley |
HORVU4Hr1G067280.13
, HORVU4Hr1G067280.12
, HORVU4Hr1G067280.11
, HORVU4Hr1G067280.6
, HORVU4Hr1G067280.5
, HORVU4Hr1G067280.2 |
| Wheat |
TraesCS4B02G242700
, TraesCS4A02G065100
, TraesCS4D02G242100 |
| Populus |
- |
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.005G065400 |
expressed protein |
- |
| 2 |
Sobic.002G285101 |
- |
- |
| 3 |
Sobic.010G002201 |
- |
- |
| 4 |
Sobic.001G439850 |
- |
- |
| 5 |
Sobic.002G227400 |
Rf1, mitochondrial precursor, putative, expressed |
- |
| 6 |
Sobic.007G171300 |
- |
- |
| 7 |
Sobic.004G048201 |
- |
- |
| 8 |
Sobic.008G087000 |
POLA2 - Putative DNA polymerase alpha complex subunit, expressed |
K02321: DNA polymerase alpha subunit B |
| 9 |
Sobic.002G088500 |
expressed protein |
- |
| 10 |
Sobic.008G091500 |
flavonol synthase/flavanone 3-hydroxylase, putative, expressed |
- |
| 11 |
Sobic.010G213100 |
RNA-dependent RNA polymerase, putative, expressed |
K11699: RDR, RNA-dependent RNA polymerase |
| 12 |
Sobic.010G051600 |
- |
- |
| 13 |
Sobic.008G139200 |
- |
- |
| 14 |
Sobic.003G385201 |
- |
- |
| 15 |
Sobic.009G174833 |
- |
- |
| 16 |
Sobic.004G173900 |
- |
- |
| 17 |
Sobic.003G091900 |
- |
- |
| 18 |
Sobic.003G118750 |
- |
- |
| 19 |
Sobic.003G336600 |
homeobox domain containing protein, expressed |
- |
| 20 |
Sobic.003G141400 |
expressed protein |
- |
Gene co-expression network
|
|
Octagon: transcription factors