Gene annotation
Transcriptome id Sobic.001G534132.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBT4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G067900 - -
2 Sobic.003G068100 receptor kinase, putative, expressed -
3 Sobic.003G272001 - -
4 Sobic.006G159500 serpin domain containing protein, putative, expressed K13963: serpin B
5 Sobic.005G185000 - -
6 Sobic.003G267150 - -
7 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
8 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
9 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
10 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
11 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
12 Sobic.004G313000 leucine rich repeat containing protein, expressed -
13 Sobic.004G262550 - -
14 Sobic.009G091940 - -
15 Sobic.006G083050 - -
16 Sobic.003G389150 - -
17 Sobic.009G115800 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
18 Sobic.002G421100 KIP1, putative, expressed -
19 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
20 Sobic.004G248000 expressed protein -


Gene co-expression network
sample Sobic001G534132 Sobic001G534132 Sobic003G067900 Sobic003G067900 Sobic001G534132--Sobic003G067900 Sobic003G068100 Sobic003G068100 Sobic001G534132--Sobic003G068100 Sobic003G272001 Sobic003G272001 Sobic001G534132--Sobic003G272001 Sobic006G159500 Sobic006G159500 Sobic001G534132--Sobic006G159500 Sobic005G185000 Sobic005G185000 Sobic001G534132--Sobic005G185000 Sobic003G267150 Sobic003G267150 Sobic001G534132--Sobic003G267150 Sobic002G160500 Sobic002G160500 Sobic001G534132--Sobic002G160500 Sobic003G067900--Sobic001G534132 Sobic003G067900--Sobic003G068100 Sobic003G067900--Sobic003G272001 Sobic005G116800 Sobic005G116800 Sobic003G067900--Sobic005G116800 Sobic006G083050 Sobic006G083050 Sobic003G067900--Sobic006G083050 Sobic003G067900--Sobic006G159500 Sobic008G142500 Sobic008G142500 Sobic003G067900--Sobic008G142500 Sobic004G264900 Sobic004G264900 Sobic003G067900--Sobic004G264900 Sobic009G115800 Sobic009G115800 Sobic003G067900--Sobic009G115800 Sobic003G068100--Sobic003G067900 Sobic003G068100--Sobic006G083050 Sobic003G068100--Sobic001G534132 Sobic003G068100--Sobic008G142500 Sobic003G068100--Sobic005G116800 Sobic001G326500 Sobic001G326500 Sobic003G068100--Sobic001G326500 Sobic002G421100 Sobic002G421100 Sobic003G068100--Sobic002G421100 Sobic003G068100--Sobic006G159500 Sobic003G068100--Sobic009G115800 Sobic003G272001--Sobic003G067900 Sobic003G272001--Sobic001G534132 Sobic001G496000 Sobic001G496000 Sobic003G272001--Sobic001G496000 Sobic003G272001--Sobic001G326500 Sobic002G099932 Sobic002G099932 Sobic003G272001--Sobic002G099932 Sobic003G272001--Sobic003G068100 Sobic002G160300 Sobic002G160300 Sobic003G272001--Sobic002G160300 Sobic003G272001--Sobic005G116800 Sobic003G272001--Sobic008G142500 Sobic006G159500--Sobic009G115800 Sobic003G261766 Sobic003G261766 Sobic006G159500--Sobic003G261766 Sobic004G313000 Sobic004G313000 Sobic006G159500--Sobic004G313000 Sobic006G159500--Sobic003G267150 Sobic005G216833 Sobic005G216833 Sobic006G159500--Sobic005G216833 Sobic002G319900 Sobic002G319900 Sobic006G159500--Sobic002G319900 Sobic006G159500--Sobic002G160500 Sobic005G185000--Sobic001G534132 Sobic005G185000--Sobic003G067900 Sobic005G185000--Sobic003G068100 Sobic005G185000--Sobic001G496000 Sobic001G182100 Sobic001G182100 Sobic005G185000--Sobic001G182100 Sobic005G185000--Sobic003G272001 Sobic005G185000--Sobic002G421100 Sobic001G334800 Sobic001G334800 Sobic005G185000--Sobic001G334800 Sobic005G185000--Sobic001G326500 Sobic003G267150--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic003G267150--Sobic004G262550 Sobic009G091940 Sobic009G091940 Sobic003G267150--Sobic009G091940 Sobic003G267150--Sobic004G313000 Sobic003G389150 Sobic003G389150 Sobic003G267150--Sobic003G389150 Sobic002G160500--Sobic002G160500 Sobic002G160500--Sobic003G267150 Sobic002G160500--Sobic004G262550 Sobic002G160500--Sobic009G091940 Sobic002G160500--Sobic003G389150 Sobic002G160500--Sobic004G313000
Octagon: transcription factors


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