Gene annotation
Transcriptome id Sobic.002G109200.1,Sobic.002G109200.2
Synonym
Functional annotation -
UniProt A0A1B6QAI7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G163433 - -
2 Sobic.008G012100 csAtPR5, putative, expressed -
3 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
4 Sobic.003G340350 - -
5 Sobic.004G206800 - -
6 Sobic.002G021900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK80 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.009G018600 TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
8 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
9 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
10 Sobic.008G012150 - -
11 Sobic.010G208750 - K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
12 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
13 Sobic.003G175800 - -
14 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.009G180550 - -
16 Sobic.008G019400 Up-reguralion under heat(PubMedID : 24916767)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
18 Sobic.001G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
19 Sobic.008G115700 MLA12, putative, expressed -
20 Sobic.006G068900 expressed protein -


Gene co-expression network
sample Sobic002G109200 Sobic002G109200 Sobic007G163433 Sobic007G163433 Sobic002G109200--Sobic007G163433 Sobic008G012100 Sobic008G012100 Sobic002G109200--Sobic008G012100 Sobic002G052100 Sobic002G052100 Sobic002G109200--Sobic002G052100 Sobic003G340350 Sobic003G340350 Sobic002G109200--Sobic003G340350 Sobic004G206800 Sobic004G206800 Sobic002G109200--Sobic004G206800 Sobic002G021900 Sobic002G021900 Sobic002G109200--Sobic002G021900 Sobic009G018600 Sobic009G018600 Sobic002G109200--Sobic009G018600 Sobic001G181100 Sobic001G181100 Sobic002G109200--Sobic001G181100 Sobic002G052000 Sobic002G052000 Sobic002G109200--Sobic002G052000 Sobic007G163433--Sobic003G340350 Sobic007G163433--Sobic004G206800 Sobic007G163433--Sobic002G021900 Sobic007G163433--Sobic008G012100 Sobic007G163433--Sobic002G052100 Sobic009G180550 Sobic009G180550 Sobic007G163433--Sobic009G180550 Sobic007G163433--Sobic002G052000 Sobic007G163433--Sobic002G109200 Sobic010G208750 Sobic010G208750 Sobic007G163433--Sobic010G208750 Sobic008G012150 Sobic008G012150 Sobic008G012100--Sobic008G012150 Sobic008G012100--Sobic007G163433 Sobic008G012100--Sobic002G021900 Sobic008G012100--Sobic003G340350 Sobic008G012100--Sobic004G206800 Sobic008G012100--Sobic010G208750 Sobic008G012100--Sobic002G109200 Sobic008G012100--Sobic002G052100 Sobic005G208200 Sobic005G208200 Sobic008G012100--Sobic005G208200 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic004G214800 Sobic004G214800 Sobic002G052100--Sobic004G214800 Sobic005G002400 Sobic005G002400 Sobic002G052100--Sobic005G002400 Sobic003G175800 Sobic003G175800 Sobic002G052100--Sobic003G175800 Sobic003G154400 Sobic003G154400 Sobic002G052100--Sobic003G154400 Sobic006G020300 Sobic006G020300 Sobic002G052100--Sobic006G020300 Sobic003G326000 Sobic003G326000 Sobic002G052100--Sobic003G326000 Sobic010G271800 Sobic010G271800 Sobic002G052100--Sobic010G271800 Sobic003G340350--Sobic004G206800 Sobic003G340350--Sobic007G163433 Sobic003G340350--Sobic002G021900 Sobic003G340350--Sobic008G012100 Sobic003G340350--Sobic002G052100 Sobic003G340350--Sobic002G052000 Sobic003G340350--Sobic009G180550 Sobic002G108700 Sobic002G108700 Sobic003G340350--Sobic002G108700 Sobic003G340350--Sobic002G109200 Sobic004G206800--Sobic003G340350 Sobic004G206800--Sobic007G163433 Sobic004G206800--Sobic002G021900 Sobic004G206800--Sobic008G012100 Sobic004G206800--Sobic002G108700 Sobic004G206800--Sobic002G052100 Sobic004G206800--Sobic002G052000 Sobic004G206800--Sobic009G180550 Sobic004G206800--Sobic002G109200 Sobic002G021900--Sobic007G163433 Sobic002G021900--Sobic003G340350 Sobic002G021900--Sobic004G206800 Sobic002G021900--Sobic008G012100 Sobic002G021900--Sobic009G180550 Sobic002G021900--Sobic010G208750 Sobic002G021900--Sobic002G052100 Sobic002G021900--Sobic008G012150 Sobic002G021900--Sobic003G175800 Sobic009G018600--Sobic002G109200 Sobic008G115700 Sobic008G115700 Sobic009G018600--Sobic008G115700 Sobic007G090451 Sobic007G090451 Sobic009G018600--Sobic007G090451 Sobic003G340300 Sobic003G340300 Sobic009G018600--Sobic003G340300 Sobic009G018600--Sobic010G208750 Sobic005G073800 Sobic005G073800 Sobic009G018600--Sobic005G073800 Sobic009G018600--Sobic008G012150 Sobic009G018600--Sobic008G012100 Sobic009G246400 Sobic009G246400 Sobic009G018600--Sobic009G246400 Sobic001G181100--Sobic002G052100 Sobic001G181100--Sobic005G002400 Sobic001G181100--Sobic003G326000 Sobic001G181100--Sobic010G271800 Sobic001G181100--Sobic004G214800 Sobic001G181100--Sobic002G052000 Sobic001G181100--Sobic003G175800 Sobic008G002400 Sobic008G002400 Sobic001G181100--Sobic008G002400 Sobic001G181100--Sobic006G020300 Sobic002G052000--Sobic002G052100 Sobic002G052000--Sobic001G181100 Sobic003G188200 Sobic003G188200 Sobic002G052000--Sobic003G188200 Sobic002G052000--Sobic003G175800 Sobic002G052000--Sobic003G154400 Sobic002G052000--Sobic004G214800 Sobic002G052000--Sobic005G002400 Sobic002G052000--Sobic007G163433 Sobic002G052000--Sobic010G271800
Octagon: transcription factors


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