Gene annotation
Transcriptome id Sobic.002G114100.1
Synonym
Functional annotation -
UniProt A0A109NDH1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G235550 - -
2 Sobic.003G068900 transferase family protein, putative, expressed -
3 Sobic.003G068900 transferase family protein, putative, expressed -
4 Sobic.003G068900 transferase family protein, putative, expressed -
5 Sobic.008G157500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@BURP domain containing protein, expressed -
6 Sobic.010G109100 - -
7 Sobic.002G036900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS3-19 - C2H2 zinc finger protein, expressed -
8 Sobic.008G132250 - -
9 Sobic.001G155900 expressed protein -
10 Sobic.008G103000 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.003G138000 expressed protein -
12 Sobic.003G058700 5-azacytidine resistance protein azr1, putative, expressed -
13 Sobic.001G102350 - -
14 Sobic.007G146350 - -
15 Sobic.004G338100 glycogen synthase 1, putative, expressed -
16 Sobic.005G004500 ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
17 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
18 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
19 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
20 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)


Gene co-expression network
sample Sobic002G114100 Sobic002G114100 Sobic010G235550 Sobic010G235550 Sobic002G114100--Sobic010G235550 Sobic003G068900 Sobic003G068900 Sobic002G114100--Sobic003G068900 Sobic008G157500 Sobic008G157500 Sobic002G114100--Sobic008G157500 Sobic010G109100 Sobic010G109100 Sobic002G114100--Sobic010G109100 Sobic002G036900 Sobic002G036900 Sobic002G114100--Sobic002G036900 Sobic008G132250 Sobic008G132250 Sobic002G114100--Sobic008G132250 Sobic001G155900 Sobic001G155900 Sobic002G114100--Sobic001G155900 Sobic010G235550--Sobic002G114100 Sobic002G114150 Sobic002G114150 Sobic010G235550--Sobic002G114150 Sobic008G103000 Sobic008G103000 Sobic010G235550--Sobic008G103000 Sobic004G000700 Sobic004G000700 Sobic010G235550--Sobic004G000700 Sobic003G138000 Sobic003G138000 Sobic010G235550--Sobic003G138000 Sobic001G350200 Sobic001G350200 Sobic010G235550--Sobic001G350200 Sobic003G068900--Sobic003G068900 Sobic003G068900--Sobic008G157500 Sobic003G068900--Sobic010G109100 Sobic002G114501 Sobic002G114501 Sobic003G068900--Sobic002G114501 Sobic004G217500 Sobic004G217500 Sobic003G068900--Sobic004G217500 Sobic003G080100 Sobic003G080100 Sobic003G068900--Sobic003G080100 Sobic005G065000 Sobic005G065000 Sobic003G068900--Sobic005G065000 Sobic010G109450 Sobic010G109450 Sobic003G068900--Sobic010G109450 Sobic008G157500--Sobic003G068900 Sobic008G157500--Sobic010G109100 Sobic001G492600 Sobic001G492600 Sobic008G157500--Sobic001G492600 Sobic008G157500--Sobic003G080100 Sobic008G157500--Sobic004G217500 Sobic008G157500--Sobic005G065000 Sobic003G012400 Sobic003G012400 Sobic008G157500--Sobic003G012400 Sobic010G109100--Sobic003G068900 Sobic010G109100--Sobic008G157500 Sobic010G109100--Sobic003G080100 Sobic010G109100--Sobic004G217500 Sobic004G317800 Sobic004G317800 Sobic010G109100--Sobic004G317800 Sobic010G109100--Sobic001G492600 Sobic006G150900 Sobic006G150900 Sobic010G109100--Sobic006G150900 Sobic007G108800 Sobic007G108800 Sobic002G036900--Sobic007G108800 Sobic008G015800 Sobic008G015800 Sobic002G036900--Sobic008G015800 Sobic005G038400 Sobic005G038400 Sobic002G036900--Sobic005G038400 Sobic007G108400 Sobic007G108400 Sobic002G036900--Sobic007G108400 Sobic009G136700 Sobic009G136700 Sobic002G036900--Sobic009G136700 Sobic004G338100 Sobic004G338100 Sobic002G036900--Sobic004G338100 Sobic002G225400 Sobic002G225400 Sobic002G036900--Sobic002G225400 Sobic006G084400 Sobic006G084400 Sobic002G036900--Sobic006G084400 Sobic005G016400 Sobic005G016400 Sobic002G036900--Sobic005G016400 Sobic009G119400 Sobic009G119400 Sobic008G132250--Sobic009G119400 Sobic002G141100 Sobic002G141100 Sobic008G132250--Sobic002G141100 Sobic007G009600 Sobic007G009600 Sobic008G132250--Sobic007G009600 Sobic001G275600 Sobic001G275600 Sobic008G132250--Sobic001G275600 Sobic010G240500 Sobic010G240500 Sobic008G132250--Sobic010G240500 Sobic009G215600 Sobic009G215600 Sobic008G132250--Sobic009G215600 Sobic010G240600 Sobic010G240600 Sobic008G132250--Sobic010G240600 Sobic004G060700 Sobic004G060700 Sobic008G132250--Sobic004G060700 Sobic002G351000 Sobic002G351000 Sobic008G132250--Sobic002G351000 Sobic001G155900--Sobic003G068900 Sobic001G469700 Sobic001G469700 Sobic001G155900--Sobic001G469700 Sobic001G155900--Sobic010G109100 Sobic001G155900--Sobic005G038400 Sobic001G155900--Sobic002G036900 Sobic001G155900--Sobic002G114100 Sobic001G155900--Sobic008G157500
Octagon: transcription factors


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