Gene annotation
Transcriptome id Sobic.001G155900.1
Synonym Sb01g013580
Functional annotation expressed protein
UniProt C5WR72
Pfam PF05553
Panther DB PTHR35997 PTHR35997:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G34610 : -
RAP-DB (Rice) LOC_Os12g42220.1 : expressed protein
MaizeGDB (Corn) Zm00025a007277
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G068900 transferase family protein, putative, expressed -
2 Sobic.003G068900 transferase family protein, putative, expressed -
3 Sobic.003G068900 transferase family protein, putative, expressed -
4 Sobic.001G469700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
5 Sobic.010G109100 - -
6 Sobic.005G038400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
7 Sobic.002G036900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS3-19 - C2H2 zinc finger protein, expressed -
8 Sobic.002G114100 - -
9 Sobic.008G157500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@BURP domain containing protein, expressed -
10 Sobic.007G108800 - -
11 Sobic.010G259100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized UPF0114 domain containing protein, expressed -
12 Sobic.002G366500 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
13 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.007G025400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
15 Sobic.008G058100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator Sir2 family protein, putative, expressed K11414: SIRT4, NAD+-dependent protein deacetylase sirtuin 4
16 Sobic.007G108400 expressed protein -
17 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.002G141800 expressed protein -
19 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
20 Sobic.003G080100 Ser/Thr protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G155900 Sobic001G155900 Sobic003G068900 Sobic003G068900 Sobic001G155900--Sobic003G068900 Sobic001G469700 Sobic001G469700 Sobic001G155900--Sobic001G469700 Sobic010G109100 Sobic010G109100 Sobic001G155900--Sobic010G109100 Sobic005G038400 Sobic005G038400 Sobic001G155900--Sobic005G038400 Sobic002G036900 Sobic002G036900 Sobic001G155900--Sobic002G036900 Sobic002G114100 Sobic002G114100 Sobic001G155900--Sobic002G114100 Sobic008G157500 Sobic008G157500 Sobic001G155900--Sobic008G157500 Sobic003G068900--Sobic003G068900 Sobic003G068900--Sobic008G157500 Sobic003G068900--Sobic010G109100 Sobic002G114501 Sobic002G114501 Sobic003G068900--Sobic002G114501 Sobic004G217500 Sobic004G217500 Sobic003G068900--Sobic004G217500 Sobic003G080100 Sobic003G080100 Sobic003G068900--Sobic003G080100 Sobic005G065000 Sobic005G065000 Sobic003G068900--Sobic005G065000 Sobic010G109450 Sobic010G109450 Sobic003G068900--Sobic010G109450 Sobic009G190600 Sobic009G190600 Sobic001G469700--Sobic009G190600 Sobic006G176500 Sobic006G176500 Sobic001G469700--Sobic006G176500 Sobic006G084400 Sobic006G084400 Sobic001G469700--Sobic006G084400 Sobic001G469700--Sobic005G038400 Sobic007G079400 Sobic007G079400 Sobic001G469700--Sobic007G079400 Sobic002G393700 Sobic002G393700 Sobic001G469700--Sobic002G393700 Sobic001G173500 Sobic001G173500 Sobic001G469700--Sobic001G173500 Sobic003G125701 Sobic003G125701 Sobic001G469700--Sobic003G125701 Sobic001G222600 Sobic001G222600 Sobic001G469700--Sobic001G222600 Sobic010G109100--Sobic003G068900 Sobic010G109100--Sobic008G157500 Sobic010G109100--Sobic003G080100 Sobic010G109100--Sobic004G217500 Sobic004G317800 Sobic004G317800 Sobic010G109100--Sobic004G317800 Sobic001G492600 Sobic001G492600 Sobic010G109100--Sobic001G492600 Sobic006G150900 Sobic006G150900 Sobic010G109100--Sobic006G150900 Sobic007G108800 Sobic007G108800 Sobic005G038400--Sobic007G108800 Sobic002G225400 Sobic002G225400 Sobic005G038400--Sobic002G225400 Sobic005G038400--Sobic006G084400 Sobic005G038400--Sobic001G222600 Sobic003G131800 Sobic003G131800 Sobic005G038400--Sobic003G131800 Sobic009G185201 Sobic009G185201 Sobic005G038400--Sobic009G185201 Sobic009G206300 Sobic009G206300 Sobic005G038400--Sobic009G206300 Sobic005G038400--Sobic001G469700 Sobic002G278800 Sobic002G278800 Sobic005G038400--Sobic002G278800 Sobic002G036900--Sobic007G108800 Sobic008G015800 Sobic008G015800 Sobic002G036900--Sobic008G015800 Sobic002G036900--Sobic005G038400 Sobic007G108400 Sobic007G108400 Sobic002G036900--Sobic007G108400 Sobic009G136700 Sobic009G136700 Sobic002G036900--Sobic009G136700 Sobic004G338100 Sobic004G338100 Sobic002G036900--Sobic004G338100 Sobic002G036900--Sobic002G225400 Sobic002G036900--Sobic006G084400 Sobic005G016400 Sobic005G016400 Sobic002G036900--Sobic005G016400 Sobic010G235550 Sobic010G235550 Sobic002G114100--Sobic010G235550 Sobic002G114100--Sobic003G068900 Sobic002G114100--Sobic008G157500 Sobic002G114100--Sobic010G109100 Sobic002G114100--Sobic002G036900 Sobic008G132250 Sobic008G132250 Sobic002G114100--Sobic008G132250 Sobic002G114100--Sobic001G155900 Sobic008G157500--Sobic003G068900 Sobic008G157500--Sobic010G109100 Sobic008G157500--Sobic001G492600 Sobic008G157500--Sobic003G080100 Sobic008G157500--Sobic004G217500 Sobic008G157500--Sobic005G065000 Sobic003G012400 Sobic003G012400 Sobic008G157500--Sobic003G012400
Octagon: transcription factors


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