Gene annotation
Transcriptome id Sobic.007G025400.1,Sobic.007G025400.2,Sobic.007G025400.4,Sobic.007G025400.3
Synonym GAPC, Sb07g002220, GAPC-1, GAPC1
Functional annotation glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
UniProt A0A1B6PF49 , A0A1B6PFC1 , A0A1B6PF41 , A0A1B6PF72
Pfam PF02800 PF00044 PF00044 PF02800
Panther DB PTHR10836 PTHR10836:SF58
NCBI CDD KOG0657; Glyceraldehyde 3-phosphate dehydrogenase
KEGG Orthology K00134; GAPDH, glyceraldehyde 3-phosphate dehydrogenase
Gene Ontology GO:0016620; oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Orthologs (automatic annotation)
TAIR AT3G04120 : glyceraldehyde-3-phosphate dehydrogenase C2,glyceraldehyde-3-phosphate dehydrogenase C subunit 1
RAP-DB (Rice) LOC_Os08g03290.1 : glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a031861 , Zm00025a040336 , Zm00025a021282 , Zm00025a030211
Brachypodium KQJ94916 , KQJ94926 , KQJ94918 , KQK17032
Barley HORVU6Hr1G089890.1 , HORVU6Hr1G054520.10 , HORVU6Hr1G054520.11 , HORVU6Hr1G054520.12 , HORVU6Hr1G054520.13 , HORVU7Hr1G074690.3 , HORVU7Hr1G074690.2 , HORVU7Hr1G074690.1 , HORVU7Hr1G074690.7 , HORVU7Hr1G074690.6 , HORVU7Hr1G074690.5 , HORVU7Hr1G074690.4 , HORVU7Hr1G074690.9 , HORVU7Hr1G074690.8 , HORVU6Hr1G032070.1 , HORVU6Hr1G032070.2 , HORVU6Hr1G032070.4 , HORVU6Hr1G032070.5 , HORVU6Hr1G032070.6 , HORVU6Hr1G032070.7 , HORVU2Hr1G123170.1 , HORVU5Hr1G117270.1 , HORVU6Hr1G089870.1 , HORVU6Hr1G089910.1 , HORVU7Hr1G074690.11 , HORVU7Hr1G074690.10 , HORVU2Hr1G123240.1 , HORVU6Hr1G054520.8 , HORVU6Hr1G054520.9 , HORVU6Hr1G054520.6 , HORVU6Hr1G054520.7 , HORVU6Hr1G054520.4 , HORVU6Hr1G054520.5 , HORVU6Hr1G054520.2 , HORVU6Hr1G054520.3 , HORVU6Hr1G054520.1
Wheat TraesCS7A02G313100 , TraesCS7B02G380500 , TraesCS6D02G196300 , TraesCS6B02G185400 , TraesCS6D02G196300 , TraesCS7B02G234400 , TraesCS7D02G309500 , TraesCS6D02G146900 , TraesCS7A02G478100 , TraesCS6A02G157500 , TraesCS7A02G478100 , TraesCS6A02G213700 , TraesCS6B02G243700 , TraesCS6B02G243700 , TraesCS7B02G213300 , TraesCS7A02G313100 , TraesCS7A02G313100 , TraesCS7A02G478100
Populus PNT01237 , PNT01234 , PNT01235 , PNT01238 , PNT10316


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cDNA sequences
Sobic.007G025400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G029800 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
2 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
3 Sobic.006G261700 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
4 Sobic.010G012800 acyl CoA binding protein, putative, expressed K08762: DBI, diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
5 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
6 Sobic.009G155300 solute carrier family 35 member F2, putative, expressed K15287: solute carrier family 35, member F1/2
7 Sobic.002G128900 thioesterase family protein, putative, expressed -
8 Sobic.008G006200 macrophage migration inhibitory factor, putative, expressed -
9 Sobic.010G026925 - K01689: ENO, enolase
10 Sobic.010G262433 - -
11 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
12 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
13 Sobic.003G125701 - -
14 Sobic.001G254600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
15 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
16 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
17 Sobic.003G229600 siroheme synthase, putative, expressed -
18 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
19 Sobic.002G393700 expressed protein -
20 Sobic.001G148500 expressed protein -


Gene co-expression network
sample Sobic007G025400 Sobic007G025400 Sobic006G029800 Sobic006G029800 Sobic007G025400--Sobic006G029800 Sobic007G069200 Sobic007G069200 Sobic007G025400--Sobic007G069200 Sobic006G261700 Sobic006G261700 Sobic007G025400--Sobic006G261700 Sobic010G012800 Sobic010G012800 Sobic007G025400--Sobic010G012800 Sobic002G279700 Sobic002G279700 Sobic007G025400--Sobic002G279700 Sobic009G155300 Sobic009G155300 Sobic007G025400--Sobic009G155300 Sobic002G128900 Sobic002G128900 Sobic007G025400--Sobic002G128900 Sobic008G006200 Sobic008G006200 Sobic007G025400--Sobic008G006200 Sobic010G026925 Sobic010G026925 Sobic007G025400--Sobic010G026925 Sobic006G029800--Sobic007G025400 Sobic001G376700 Sobic001G376700 Sobic006G029800--Sobic001G376700 Sobic009G093900 Sobic009G093900 Sobic006G029800--Sobic009G093900 Sobic006G029800--Sobic006G261700 Sobic001G295300 Sobic001G295300 Sobic006G029800--Sobic001G295300 Sobic010G208400 Sobic010G208400 Sobic006G029800--Sobic010G208400 Sobic009G124000 Sobic009G124000 Sobic006G029800--Sobic009G124000 Sobic001G291900 Sobic001G291900 Sobic006G029800--Sobic001G291900 Sobic006G029800--Sobic007G069200 Sobic003G216500 Sobic003G216500 Sobic007G069200--Sobic003G216500 Sobic001G447600 Sobic001G447600 Sobic007G069200--Sobic001G447600 Sobic001G173500 Sobic001G173500 Sobic007G069200--Sobic001G173500 Sobic003G244200 Sobic003G244200 Sobic007G069200--Sobic003G244200 Sobic005G133900 Sobic005G133900 Sobic007G069200--Sobic005G133900 Sobic009G072000 Sobic009G072000 Sobic007G069200--Sobic009G072000 Sobic007G069200--Sobic007G025400 Sobic010G054000 Sobic010G054000 Sobic007G069200--Sobic010G054000 Sobic007G069200--Sobic006G029800 Sobic006G261700--Sobic002G279700 Sobic009G140300 Sobic009G140300 Sobic006G261700--Sobic009G140300 Sobic008G171300 Sobic008G171300 Sobic006G261700--Sobic008G171300 Sobic001G020100 Sobic001G020100 Sobic006G261700--Sobic001G020100 Sobic004G307400 Sobic004G307400 Sobic006G261700--Sobic004G307400 SobicK031800 SobicK031800 Sobic006G261700--SobicK031800 Sobic004G343900 Sobic004G343900 Sobic006G261700--Sobic004G343900 Sobic008G188600 Sobic008G188600 Sobic006G261700--Sobic008G188600 Sobic001G254600 Sobic001G254600 Sobic006G261700--Sobic001G254600 Sobic010G195701 Sobic010G195701 Sobic010G012800--Sobic010G195701 Sobic010G279200 Sobic010G279200 Sobic010G012800--Sobic010G279200 Sobic001G219300 Sobic001G219300 Sobic010G012800--Sobic001G219300 Sobic001G428200 Sobic001G428200 Sobic010G012800--Sobic001G428200 Sobic001G388600 Sobic001G388600 Sobic010G012800--Sobic001G388600 Sobic002G363100 Sobic002G363100 Sobic010G012800--Sobic002G363100 Sobic010G044200 Sobic010G044200 Sobic010G012800--Sobic010G044200 Sobic006G244700 Sobic006G244700 Sobic010G012800--Sobic006G244700 Sobic003G325500 Sobic003G325500 Sobic010G012800--Sobic003G325500 Sobic002G279700--Sobic002G128900 Sobic002G279700--Sobic006G261700 Sobic002G279700--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic002G279700--Sobic008G188600 Sobic002G279700--Sobic001G020100 Sobic002G279700--Sobic008G006200 Sobic002G279700--Sobic004G307400 Sobic006G271500 Sobic006G271500 Sobic009G155300--Sobic006G271500 Sobic009G155300--Sobic002G128900 Sobic009G207300 Sobic009G207300 Sobic009G155300--Sobic009G207300 Sobic004G113100 Sobic004G113100 Sobic009G155300--Sobic004G113100 Sobic010G049100 Sobic010G049100 Sobic009G155300--Sobic010G049100 Sobic004G121300 Sobic004G121300 Sobic009G155300--Sobic004G121300 Sobic002G230600 Sobic002G230600 Sobic009G155300--Sobic002G230600 Sobic001G048200 Sobic001G048200 Sobic009G155300--Sobic001G048200 Sobic009G155300--Sobic002G279700 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G128900--Sobic002G279700 Sobic002G128900--Sobic001G295300 Sobic002G128900--Sobic002G200900 Sobic004G281900 Sobic004G281900 Sobic002G128900--Sobic004G281900 Sobic002G072400 Sobic002G072400 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic010G269400 Sobic010G269400 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic005G073200 Sobic005G073200 Sobic008G006200--Sobic005G073200 Sobic008G006200--Sobic002G279700 Sobic008G006200--SobicK031800 Sobic003G219200 Sobic003G219200 Sobic008G006200--Sobic003G219200 Sobic002G275300 Sobic002G275300 Sobic008G006200--Sobic002G275300 Sobic004G268000 Sobic004G268000 Sobic008G006200--Sobic004G268000 Sobic009G129300 Sobic009G129300 Sobic008G006200--Sobic009G129300 Sobic008G006200--Sobic009G140300 Sobic010G181300 Sobic010G181300 Sobic008G006200--Sobic010G181300 Sobic003G336000 Sobic003G336000 Sobic010G026925--Sobic003G336000 Sobic005G033200 Sobic005G033200 Sobic010G026925--Sobic005G033200 Sobic006G276700 Sobic006G276700 Sobic010G026925--Sobic006G276700 Sobic001G301800 Sobic001G301800 Sobic010G026925--Sobic001G301800 Sobic001G290700 Sobic001G290700 Sobic010G026925--Sobic001G290700 Sobic006G178000 Sobic006G178000 Sobic010G026925--Sobic006G178000 Sobic010G026925--Sobic003G216500 Sobic010G027000 Sobic010G027000 Sobic010G026925--Sobic010G027000 Sobic009G017800 Sobic009G017800 Sobic010G026925--Sobic009G017800
Octagon: transcription factors


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