Gene annotation
| Transcriptome id | Sobic.008G103000.1 |
|---|---|
| Synonym | BPM2, ATBPM2, Sb08g015510 |
| Functional annotation | MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
| UniProt | A0A1Z5R5W8 |
| Pfam | PF00651 |
| Panther DB | PTHR26379 PTHR26379:SF180 |
| NCBI CDD | - |
| KEGG Orthology | K10523; speckle-type POZ protein |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT3G06190 : BTB-POZ and MATH domain 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os06g45730.1 : MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | TraesCS2B02G495900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 2 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 3 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 4 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 5 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 6 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 7 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 8 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 9 | Sobic.001G350200 | sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed | K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) |
| 10 | Sobic.008G088400 | - | - |
| 11 | Sobic.003G138000 | expressed protein | - |
| 12 | Sobic.005G056201 | - | - |
| 13 | Sobic.001G323801 | - | - |
| 14 | Sobic.004G076000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed | - |
| 15 | Sobic.003G074600 | Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed | K06129: lysophospholipase III |
| 16 | Sobic.006G172700 | LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 17 | Sobic.001G017000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal protein S6, putative, expressed | K02990: RP-S6, MRPS6, small subunit ribosomal protein S6 |
| 18 | Sobic.001G170900 | expressed protein | - |
| 19 | Sobic.001G394250 | - | - |
| 20 | Sobic.010G235550 | - | - |
Gene co-expression network
Octagon: transcription factors
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