Gene annotation
Transcriptome id Sobic.002G171500.1
Synonym Sb02g022060
Functional annotation OsFBX311 - F-box domain containing protein, expressed
UniProt C5X9U2
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF129
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g15440.1 : OsFBX311 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G229250 - -
2 Sobic.006G124000 BTBZ4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -
3 Sobic.005G117901 - -
4 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
5 Sobic.002G048300 expressed protein -
6 Sobic.002G048300 expressed protein -
7 Sobic.002G048300 expressed protein -
8 Sobic.002G048300 expressed protein -
9 Sobic.002G048300 expressed protein -
10 Sobic.002G048300 expressed protein -
11 Sobic.002G048300 expressed protein -
12 Sobic.005G110520 - -
13 Sobic.008G101350 - -
14 Sobic.004G279300 photoperiodic flowering time gene(PubMedID : 22394582)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
15 Sobic.001G243901 - -
16 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
17 Sobic.005G130450 - -
18 Sobic.004G096200 - -
19 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
20 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -


Gene co-expression network
sample Sobic002G171500 Sobic002G171500 Sobic002G229250 Sobic002G229250 Sobic002G171500--Sobic002G229250 Sobic006G124000 Sobic006G124000 Sobic002G171500--Sobic006G124000 Sobic005G117901 Sobic005G117901 Sobic002G171500--Sobic005G117901 Sobic003G117000 Sobic003G117000 Sobic002G171500--Sobic003G117000 Sobic002G048300 Sobic002G048300 Sobic002G171500--Sobic002G048300 Sobic002G229250--Sobic002G171500 Sobic005G110520 Sobic005G110520 Sobic002G229250--Sobic005G110520 Sobic002G229250--Sobic002G048300 Sobic006G257900 Sobic006G257900 Sobic006G124000--Sobic006G257900 Sobic006G191600 Sobic006G191600 Sobic006G124000--Sobic006G191600 Sobic010G218100 Sobic010G218100 Sobic006G124000--Sobic010G218100 Sobic010G154150 Sobic010G154150 Sobic006G124000--Sobic010G154150 Sobic001G225100 Sobic001G225100 Sobic006G124000--Sobic001G225100 Sobic006G124000--Sobic003G117000 Sobic006G124000--Sobic002G171500 Sobic001G311000 Sobic001G311000 Sobic006G124000--Sobic001G311000 Sobic001G076000 Sobic001G076000 Sobic006G124000--Sobic001G076000 Sobic001G243901 Sobic001G243901 Sobic005G117901--Sobic001G243901 Sobic008G101350 Sobic008G101350 Sobic005G117901--Sobic008G101350 Sobic004G096200 Sobic004G096200 Sobic005G117901--Sobic004G096200 Sobic005G130450 Sobic005G130450 Sobic005G117901--Sobic005G130450 Sobic004G279300 Sobic004G279300 Sobic005G117901--Sobic004G279300 Sobic001G515600 Sobic001G515600 Sobic005G117901--Sobic001G515600 Sobic007G211000 Sobic007G211000 Sobic005G117901--Sobic007G211000 Sobic005G117901--Sobic002G048300 Sobic003G117000--Sobic007G211000 Sobic002G284200 Sobic002G284200 Sobic003G117000--Sobic002G284200 Sobic007G150200 Sobic007G150200 Sobic003G117000--Sobic007G150200 Sobic003G117000--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic003G117000--Sobic010G218500 Sobic001G024200 Sobic001G024200 Sobic003G117000--Sobic001G024200 Sobic003G117000--Sobic001G243901 Sobic003G121400 Sobic003G121400 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950 Sobic002G048300--Sobic002G048300 Sobic002G048300--Sobic008G101350 Sobic002G048300--Sobic005G117901 Sobic002G048300--Sobic004G096200
Octagon: transcription factors


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