Gene annotation
Transcriptome id Sobic.002G322600.1
Synonym Sb02g035020
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5XA45
Pfam -
Panther DB PTHR31852 PTHR31852:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54200 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os07g34040.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014820
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G141400 expressed protein -
2 Sobic.007G007600 OsFBL38 - F-box domain and LRR containing protein, expressed -
3 Sobic.007G074800 O-methyltransferase, putative, expressed -
4 Sobic.002G036500 ZOS7-02 - C2H2 zinc finger protein, expressed -
5 Sobic.007G064000 expressed protein -
6 Sobic.004G243700 - -
7 Sobic.002G208850 - -
8 Sobic.008G139250 - -
9 Sobic.007G048400 berberine and berberine like domain containing protein, expressed -
10 Sobic.004G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase CCR1 (At)(PubMedID : 27208977)@cinnamoyl CoA reductase, putative, expressed -
11 Sobic.002G175700 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
12 Sobic.006G151100 oxygen-evolving enhancer protein 3, chloroplast precursor, putative, expressed -
13 Sobic.003G126750 - -
14 Sobic.001G261464 - -
15 Sobic.004G358200 RING-H2 finger protein, putative, expressed -
16 Sobic.005G031901 - -
17 Sobic.005G048100 - -
18 Sobic.006G109600 - -
19 Sobic.010G147300 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
20 Sobic.006G105200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase


Gene co-expression network
sample Sobic002G322600 Sobic002G322600 Sobic006G141400 Sobic006G141400 Sobic002G322600--Sobic006G141400 Sobic007G007600 Sobic007G007600 Sobic002G322600--Sobic007G007600 Sobic007G074800 Sobic007G074800 Sobic002G322600--Sobic007G074800 Sobic002G036500 Sobic002G036500 Sobic002G322600--Sobic002G036500 Sobic007G064000 Sobic007G064000 Sobic002G322600--Sobic007G064000 Sobic004G243700 Sobic004G243700 Sobic002G322600--Sobic004G243700 Sobic002G208850 Sobic002G208850 Sobic002G322600--Sobic002G208850 Sobic008G139250 Sobic008G139250 Sobic002G322600--Sobic008G139250 Sobic007G048400 Sobic007G048400 Sobic002G322600--Sobic007G048400 Sobic006G141400--Sobic007G007600 Sobic006G141400--Sobic002G036500 Sobic006G141400--Sobic007G064000 Sobic002G175700 Sobic002G175700 Sobic006G141400--Sobic002G175700 Sobic006G141400--Sobic002G208850 Sobic006G151100 Sobic006G151100 Sobic006G141400--Sobic006G151100 Sobic005G031901 Sobic005G031901 Sobic006G141400--Sobic005G031901 Sobic006G109600 Sobic006G109600 Sobic006G141400--Sobic006G109600 Sobic003G126750 Sobic003G126750 Sobic006G141400--Sobic003G126750 Sobic007G007600--Sobic002G036500 Sobic007G007600--Sobic006G141400 Sobic007G007600--Sobic007G064000 Sobic007G007600--Sobic002G175700 Sobic007G007600--Sobic006G151100 Sobic007G007600--Sobic005G031901 Sobic004G358200 Sobic004G358200 Sobic007G007600--Sobic004G358200 Sobic007G007600--Sobic006G109600 Sobic007G007600--Sobic003G126750 Sobic007G074800--Sobic002G322600 Sobic005G217600 Sobic005G217600 Sobic007G074800--Sobic005G217600 Sobic003G346901 Sobic003G346901 Sobic007G074800--Sobic003G346901 Sobic010G085500 Sobic010G085500 Sobic007G074800--Sobic010G085500 Sobic001G349100 Sobic001G349100 Sobic007G074800--Sobic001G349100 Sobic010G064000 Sobic010G064000 Sobic007G074800--Sobic010G064000 Sobic008G014000 Sobic008G014000 Sobic007G074800--Sobic008G014000 Sobic001G502400 Sobic001G502400 Sobic007G074800--Sobic001G502400 Sobic001G313600 Sobic001G313600 Sobic007G074800--Sobic001G313600 Sobic002G036500--Sobic007G007600 Sobic002G036500--Sobic006G141400 Sobic002G036500--Sobic007G064000 Sobic002G036500--Sobic006G151100 Sobic002G036500--Sobic002G208850 Sobic001G329001 Sobic001G329001 Sobic002G036500--Sobic001G329001 Sobic002G086700 Sobic002G086700 Sobic002G036500--Sobic002G086700 Sobic002G257150 Sobic002G257150 Sobic002G036500--Sobic002G257150 Sobic002G036500--Sobic002G175700 Sobic007G064000--Sobic005G031901 Sobic007G064000--Sobic002G175700 Sobic007G064000--Sobic006G109600 Sobic007G064000--Sobic003G126750 Sobic010G147300 Sobic010G147300 Sobic007G064000--Sobic010G147300 Sobic001G261464 Sobic001G261464 Sobic007G064000--Sobic001G261464 Sobic002G100100 Sobic002G100100 Sobic007G064000--Sobic002G100100 Sobic007G064000--Sobic007G007600 Sobic007G064000--Sobic004G358200 Sobic004G243700--Sobic003G126750 Sobic004G243700--Sobic001G261464 Sobic004G243700--Sobic002G100100 Sobic004G243700--Sobic006G109600 Sobic004G243700--Sobic005G031901 Sobic004G243700--Sobic010G147300 Sobic002G026150 Sobic002G026150 Sobic004G243700--Sobic002G026150 Sobic006G026300 Sobic006G026300 Sobic004G243700--Sobic006G026300 Sobic004G243700--Sobic004G358200 Sobic002G208850--Sobic006G141400 Sobic002G208850--Sobic002G036500 Sobic002G208850--Sobic007G007600 Sobic010G256866 Sobic010G256866 Sobic002G208850--Sobic010G256866 Sobic002G208850--Sobic002G175700 Sobic002G215932 Sobic002G215932 Sobic002G208850--Sobic002G215932 Sobic002G208850--Sobic007G064000 Sobic001G182400 Sobic001G182400 Sobic002G208850--Sobic001G182400 Sobic002G208850--Sobic006G151100 Sobic008G139250--Sobic005G031901 Sobic008G139250--Sobic001G261464 Sobic008G139250--Sobic003G126750 Sobic008G139250--Sobic006G109600 Sobic008G139250--Sobic004G358200 Sobic008G139250--Sobic010G147300 Sobic008G139250--Sobic002G100100 Sobic008G079733 Sobic008G079733 Sobic008G139250--Sobic008G079733 Sobic008G139250--Sobic002G026150 Sobic007G048400--Sobic001G261464 Sobic007G048400--Sobic004G243700 Sobic007G048400--Sobic003G126750 Sobic007G048400--Sobic002G100100 Sobic007G048400--Sobic005G031901 Sobic007G048400--Sobic006G109600 Sobic007G048400--Sobic010G147300 Sobic004G358301 Sobic004G358301 Sobic007G048400--Sobic004G358301 Sobic007G048400--Sobic002G175700
Octagon: transcription factors


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