Gene annotation
Transcriptome id Sobic.006G105200.1
Synonym Sb06g018830
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
aldose 1-epimerase, putative, expressed
UniProt C5Y9T3
Pfam PF01263
Panther DB PTHR10091 PTHR10091:SF13
NCBI CDD KOG1604; Predicted mutarotase
KEGG Orthology K01785; galM, aldose 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G15140 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os04g38540.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a020797 , Zm00025a011133 , Zm00025a056196
Brachypodium KQJ82952 , KQJ82953 , KQJ82956
Barley HORVU2Hr1G080140.1 , HORVU2Hr1G080140.3 , HORVU2Hr1G080140.2 , HORVU2Hr1G080140.5 , HORVU2Hr1G080140.4 , HORVU2Hr1G080140.7 , HORVU2Hr1G080140.6 , HORVU2Hr1G080060.2 , HORVU2Hr1G080060.3 , HORVU2Hr1G080060.1 , HORVU2Hr1G080060.4 , HORVU2Hr1G080190.2 , HORVU2Hr1G080190.1
Wheat TraesCS2A02G343900 , TraesCS2A02G343600 , TraesCS2A02G343600 , TraesCS2B02G341200 , TraesCS2A02G344000 , TraesCS2D02G322200 , TraesCS2B02G341400 , TraesCS2B02G341400 , TraesCS2B02G341500 , TraesCS2A02G343800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G194900 proline-rich protein 6, putative, expressed -
2 Sobic.007G135301 - -
3 Sobic.001G073800 receptor-like kinase, putative, expressed -
4 Sobic.009G246800 protein Kinase, putative, expressed -
5 Sobic.006G087250 - -
6 Sobic.010G036400 expressed protein -
7 Sobic.007G022300 carrier, putative, expressed -
8 Sobic.001G045500 RD26, putative, expressed -
9 Sobic.008G139100 MLA12, putative, expressed -
10 Sobic.009G206150 - -
11 Sobic.002G322600 harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
13 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
14 Sobic.007G114401 - -
15 Sobic.005G008400 pentatricopeptide, putative, expressed -
16 Sobic.001G195550 - -
17 Sobic.004G346800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
18 Sobic.004G346700 expressed protein -
19 Sobic.005G142600 plant protein of unknown function domain containing protein, expressed -
20 Sobic.002G325700 expressed protein -


Gene co-expression network
sample Sobic006G105200 Sobic006G105200 Sobic002G194900 Sobic002G194900 Sobic006G105200--Sobic002G194900 Sobic007G135301 Sobic007G135301 Sobic006G105200--Sobic007G135301 Sobic001G073800 Sobic001G073800 Sobic006G105200--Sobic001G073800 Sobic009G246800 Sobic009G246800 Sobic006G105200--Sobic009G246800 Sobic006G087250 Sobic006G087250 Sobic006G105200--Sobic006G087250 Sobic010G036400 Sobic010G036400 Sobic006G105200--Sobic010G036400 Sobic007G022300 Sobic007G022300 Sobic006G105200--Sobic007G022300 Sobic001G045500 Sobic001G045500 Sobic006G105200--Sobic001G045500 Sobic008G139100 Sobic008G139100 Sobic006G105200--Sobic008G139100 Sobic002G194900--Sobic006G105200 Sobic001G410400 Sobic001G410400 Sobic002G194900--Sobic001G410400 Sobic002G194900--Sobic006G087250 Sobic002G194900--Sobic007G135301 Sobic003G137300 Sobic003G137300 Sobic002G194900--Sobic003G137300 Sobic003G380800 Sobic003G380800 Sobic002G194900--Sobic003G380800 Sobic009G046300 Sobic009G046300 Sobic002G194900--Sobic009G046300 Sobic001G329001 Sobic001G329001 Sobic002G194900--Sobic001G329001 Sobic001G129200 Sobic001G129200 Sobic002G194900--Sobic001G129200 Sobic001G195550 Sobic001G195550 Sobic007G135301--Sobic001G195550 Sobic004G346700 Sobic004G346700 Sobic007G135301--Sobic004G346700 Sobic004G346800 Sobic004G346800 Sobic007G135301--Sobic004G346800 Sobic007G135301--Sobic006G087250 Sobic001G417100 Sobic001G417100 Sobic007G135301--Sobic001G417100 Sobic007G223150 Sobic007G223150 Sobic007G135301--Sobic007G223150 Sobic001G071250 Sobic001G071250 Sobic007G135301--Sobic001G071250 Sobic007G135301--Sobic001G045500 Sobic009G206150 Sobic009G206150 Sobic007G135301--Sobic009G206150 Sobic003G365500 Sobic003G365500 Sobic001G073800--Sobic003G365500 Sobic001G515400 Sobic001G515400 Sobic001G073800--Sobic001G515400 Sobic001G073800--Sobic008G139100 Sobic006G020350 Sobic006G020350 Sobic001G073800--Sobic006G020350 Sobic002G373900 Sobic002G373900 Sobic001G073800--Sobic002G373900 Sobic005G008400 Sobic005G008400 Sobic001G073800--Sobic005G008400 Sobic002G149966 Sobic002G149966 Sobic001G073800--Sobic002G149966 Sobic003G290050 Sobic003G290050 Sobic001G073800--Sobic003G290050 Sobic001G073800--Sobic001G071250 Sobic009G246800--Sobic006G105200 Sobic010G131950 Sobic010G131950 Sobic009G246800--Sobic010G131950 Sobic009G246800--Sobic002G194900 Sobic002G322600 Sobic002G322600 Sobic009G246800--Sobic002G322600 Sobic001G501100 Sobic001G501100 Sobic009G246800--Sobic001G501100 Sobic003G159000 Sobic003G159000 Sobic009G246800--Sobic003G159000 Sobic001G182400 Sobic001G182400 Sobic009G246800--Sobic001G182400 Sobic004G243000 Sobic004G243000 Sobic009G246800--Sobic004G243000 Sobic009G246800--Sobic006G087250 Sobic006G087250--Sobic007G135301 Sobic006G087250--Sobic004G346800 Sobic001G048300 Sobic001G048300 Sobic006G087250--Sobic001G048300 Sobic006G087250--Sobic003G137300 Sobic006G087250--Sobic001G071250 Sobic007G226300 Sobic007G226300 Sobic006G087250--Sobic007G226300 Sobic006G087250--Sobic001G195550 Sobic009G069450 Sobic009G069450 Sobic006G087250--Sobic009G069450 Sobic003G393600 Sobic003G393600 Sobic006G087250--Sobic003G393600 Sobic001G317700 Sobic001G317700 Sobic010G036400--Sobic001G317700 Sobic010G036400--Sobic004G243000 Sobic007G085300 Sobic007G085300 Sobic010G036400--Sobic007G085300 Sobic005G013901 Sobic005G013901 Sobic010G036400--Sobic005G013901 Sobic010G036400--Sobic001G073800 Sobic004G231001 Sobic004G231001 Sobic010G036400--Sobic004G231001 Sobic003G323800 Sobic003G323800 Sobic010G036400--Sobic003G323800 Sobic003G314200 Sobic003G314200 Sobic010G036400--Sobic003G314200 Sobic010G036400--Sobic006G105200 Sobic001G035300 Sobic001G035300 Sobic007G022300--Sobic001G035300 Sobic009G092200 Sobic009G092200 Sobic007G022300--Sobic009G092200 Sobic001G317900 Sobic001G317900 Sobic007G022300--Sobic001G317900 Sobic002G191200 Sobic002G191200 Sobic007G022300--Sobic002G191200 Sobic008G174400 Sobic008G174400 Sobic007G022300--Sobic008G174400 Sobic005G083932 Sobic005G083932 Sobic007G022300--Sobic005G083932 Sobic001G045500--Sobic008G139100 Sobic001G045500--Sobic005G008400 Sobic001G045500--Sobic004G346800 Sobic001G045500--Sobic004G346700 Sobic001G045500--Sobic001G195550 Sobic002G174000 Sobic002G174000 Sobic001G045500--Sobic002G174000 Sobic003G168350 Sobic003G168350 Sobic001G045500--Sobic003G168350 Sobic001G045500--Sobic001G071250 Sobic004G198701 Sobic004G198701 Sobic001G045500--Sobic004G198701 Sobic008G139100--Sobic002G174000 Sobic008G139100--Sobic004G346700 Sobic001G260900 Sobic001G260900 Sobic008G139100--Sobic001G260900 Sobic002G288800 Sobic002G288800 Sobic008G139100--Sobic002G288800 Sobic007G115050 Sobic007G115050 Sobic008G139100--Sobic007G115050 Sobic008G139100--Sobic005G008400 Sobic008G139100--Sobic001G195550 Sobic008G139100--Sobic001G045500 Sobic008G139100--Sobic004G198701
Octagon: transcription factors


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