Gene annotation
Transcriptome id Sobic.005G142600.1
Synonym Sb05g020790
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt C5Y3V0
Pfam PF03140
Panther DB PTHR31549:SF19 PTHR31549
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50170 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os11g34090.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015717 , Zm00025a046576 , Zm00025a033558
Brachypodium KQK07792 , KQJ88313 , PNT63518 , PNT63512 , PNT63516 , KQJ88308 , KQK01655
Barley HORVU1Hr1G061120.3 , HORVU1Hr1G061120.2 , HORVU1Hr1G061120.1 , HORVU3Hr1G094300.5 , HORVU3Hr1G094300.4 , HORVU3Hr1G094300.3 , HORVU3Hr1G094300.2 , HORVU3Hr1G094300.1 , HORVU2Hr1G127210.1 , HORVU2Hr1G127210.2 , HORVU6Hr1G061190.3 , HORVU6Hr1G061190.2 , HORVU6Hr1G061190.1 , HORVU6Hr1G061190.5 , HORVU6Hr1G061190.4 , HORVU7Hr1G089850.1 , HORVU7Hr1G089850.3 , HORVU7Hr1G089850.2 , HORVU7Hr1G089850.5 , HORVU7Hr1G089850.4
Wheat TraesCS6B02G042300 , TraesCS6A02G029700 , TraesCS1D02G253000 , TraesCS4D02G108600 , TraesCS6D02G033900 , TraesCS2B02G619400 , TraesCS1A02G253500 , TraesCS6D02G221900 , TraesCS4B02G110900 , TraesCS6D02G034000 , TraesCS7A02G375800 , TraesCS6A02G239500 , TraesCS6A02G239500 , TraesCS6A02G239500 , TraesCS6A02G029600 , TraesCS6A02G029600 , TraesCS2B02G619700 , TraesCS2A02G559900 , TraesCS4A02G207400 , TraesCS6D02G221900 , TraesCS1B02G264700 , TraesCS6D02G033800 , TraesCS2D02G570100 , TraesCS6B02G042200 , TraesCS7D02G372300 , TraesCS6A02G029400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G247400 transferase family protein, putative, expressed -
2 Sobic.005G161000 expressed protein -
3 Sobic.007G084400 - -
4 Sobic.002G246950 - -
5 Sobic.001G484500 - -
6 Sobic.003G398900 tetratricopeptide-like helical, putative, expressed -
7 Sobic.001G540250 - -
8 Sobic.009G160300 - -
9 Sobic.010G079300 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
10 Sobic.001G217800 - -
11 Sobic.009G104850 - -
12 Sobic.002G060750 - -
13 Sobic.005G101400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
14 Sobic.010G258600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.003G249500 expressed protein -
16 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
17 Sobic.003G249300 expressed protein -
18 Sobic.001G302100 holliday junction resolvase, putative, expressed K07447: putative holliday junction resolvase
19 Sobic.007G052500 - -
20 Sobic.003G159000 - -


Gene co-expression network
sample Sobic005G142600 Sobic005G142600 Sobic006G247400 Sobic006G247400 Sobic005G142600--Sobic006G247400 Sobic005G161000 Sobic005G161000 Sobic005G142600--Sobic005G161000 Sobic007G084400 Sobic007G084400 Sobic005G142600--Sobic007G084400 Sobic002G246950 Sobic002G246950 Sobic005G142600--Sobic002G246950 Sobic001G484500 Sobic001G484500 Sobic005G142600--Sobic001G484500 Sobic003G398900 Sobic003G398900 Sobic005G142600--Sobic003G398900 Sobic001G540250 Sobic001G540250 Sobic005G142600--Sobic001G540250 Sobic009G160300 Sobic009G160300 Sobic005G142600--Sobic009G160300 Sobic010G079300 Sobic010G079300 Sobic005G142600--Sobic010G079300 Sobic001G448350 Sobic001G448350 Sobic006G247400--Sobic001G448350 Sobic001G048300 Sobic001G048300 Sobic006G247400--Sobic001G048300 Sobic007G085966 Sobic007G085966 Sobic006G247400--Sobic007G085966 Sobic006G247400--Sobic007G084400 Sobic006G247400--Sobic005G161000 Sobic003G123500 Sobic003G123500 Sobic006G247400--Sobic003G123500 Sobic005G008101 Sobic005G008101 Sobic006G247400--Sobic005G008101 Sobic004G201800 Sobic004G201800 Sobic006G247400--Sobic004G201800 Sobic005G017900 Sobic005G017900 Sobic006G247400--Sobic005G017900 Sobic005G161000--Sobic003G398900 Sobic005G161000--Sobic001G484500 Sobic003G336400 Sobic003G336400 Sobic005G161000--Sobic003G336400 Sobic005G161000--Sobic006G247400 Sobic010G258600 Sobic010G258600 Sobic005G161000--Sobic010G258600 Sobic005G161000--Sobic002G246950 Sobic005G161000--Sobic007G084400 Sobic005G161000--Sobic009G160300 Sobic002G411700 Sobic002G411700 Sobic005G161000--Sobic002G411700 Sobic003G159000 Sobic003G159000 Sobic007G084400--Sobic003G159000 Sobic007G084400--Sobic009G160300 Sobic005G048300 Sobic005G048300 Sobic007G084400--Sobic005G048300 Sobic003G137300 Sobic003G137300 Sobic007G084400--Sobic003G137300 Sobic007G084400--Sobic006G247400 Sobic007G084400--Sobic002G246950 Sobic007G052500 Sobic007G052500 Sobic007G084400--Sobic007G052500 Sobic007G084400--Sobic001G540250 Sobic003G194900 Sobic003G194900 Sobic007G084400--Sobic003G194900 Sobic002G060750 Sobic002G060750 Sobic002G246950--Sobic002G060750 Sobic002G246950--Sobic003G398900 Sobic003G018400 Sobic003G018400 Sobic002G246950--Sobic003G018400 Sobic003G303800 Sobic003G303800 Sobic002G246950--Sobic003G303800 Sobic001G378150 Sobic001G378150 Sobic002G246950--Sobic001G378150 Sobic002G246950--Sobic002G411700 Sobic002G285950 Sobic002G285950 Sobic002G246950--Sobic002G285950 Sobic002G149550 Sobic002G149550 Sobic002G246950--Sobic002G149550 Sobic007G094000 Sobic007G094000 Sobic002G246950--Sobic007G094000 Sobic001G484500--Sobic003G398900 Sobic001G484500--Sobic009G160300 Sobic001G484500--Sobic007G052500 Sobic001G484500--Sobic005G161000 Sobic001G484500--Sobic003G303800 Sobic001G484500--Sobic002G246950 Sobic001G283800 Sobic001G283800 Sobic001G484500--Sobic001G283800 Sobic001G484500--Sobic006G247400 Sobic001G278400 Sobic001G278400 Sobic001G484500--Sobic001G278400 Sobic003G398900--Sobic002G246950 Sobic003G398900--Sobic002G411700 Sobic003G398900--Sobic005G161000 Sobic003G398900--Sobic001G484500 Sobic003G398900--Sobic003G336400 Sobic003G398900--Sobic003G303800 Sobic003G398900--Sobic002G060750 Sobic003G398900--Sobic009G160300 Sobic006G116600 Sobic006G116600 Sobic003G398900--Sobic006G116600 Sobic003G249300 Sobic003G249300 Sobic001G540250--Sobic003G249300 Sobic001G217800 Sobic001G217800 Sobic001G540250--Sobic001G217800 Sobic005G101400 Sobic005G101400 Sobic001G540250--Sobic005G101400 Sobic004G125701 Sobic004G125701 Sobic001G540250--Sobic004G125701 Sobic001G302100 Sobic001G302100 Sobic001G540250--Sobic001G302100 Sobic002G341600 Sobic002G341600 Sobic001G540250--Sobic002G341600 Sobic009G104850 Sobic009G104850 Sobic001G540250--Sobic009G104850 Sobic005G167450 Sobic005G167450 Sobic001G540250--Sobic005G167450 Sobic008G013700 Sobic008G013700 Sobic001G540250--Sobic008G013700 Sobic009G160300--Sobic007G052500 Sobic008G039200 Sobic008G039200 Sobic009G160300--Sobic008G039200 Sobic001G089900 Sobic001G089900 Sobic009G160300--Sobic001G089900 Sobic010G154801 Sobic010G154801 Sobic009G160300--Sobic010G154801 Sobic003G253100 Sobic003G253100 Sobic009G160300--Sobic003G253100 Sobic010G277400 Sobic010G277400 Sobic009G160300--Sobic010G277400 Sobic009G160300--Sobic001G283800 Sobic009G209150 Sobic009G209150 Sobic009G160300--Sobic009G209150 Sobic009G160300--Sobic001G484500 Sobic010G180550 Sobic010G180550 Sobic010G079300--Sobic010G180550 Sobic009G092300 Sobic009G092300 Sobic010G079300--Sobic009G092300 Sobic010G079300--Sobic002G246950 Sobic003G369566 Sobic003G369566 Sobic010G079300--Sobic003G369566 Sobic001G098700 Sobic001G098700 Sobic010G079300--Sobic001G098700 Sobic010G079300--Sobic001G283800 Sobic004G191901 Sobic004G191901 Sobic010G079300--Sobic004G191901 Sobic002G311900 Sobic002G311900 Sobic010G079300--Sobic002G311900 Sobic004G098100 Sobic004G098100 Sobic010G079300--Sobic004G098100
Octagon: transcription factors


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