Gene annotation
Transcriptome id Sobic.005G161000.1
Synonym Sb05g022270
Functional annotation expressed protein
UniProt C5Y4W5
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF39
NCBI CDD KOG4848; Extracellular matrix-associated peroxidase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45530 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os10g05410.1 : expressed protein
MaizeGDB (Corn) Zm00025a033881 , Zm00025a033857 , Zm00025a033859
Brachypodium PNT78225 , PNT78203 , PNT78226
Barley -
Wheat TraesCS5D02G355000 , TraesCS2B02G579500 , TraesCS5D02G544100 , TraesCS5D02G371000 , TraesCS5B02G364800 , TraesCS1B02G052200 , TraesCS5D02G370800 , TraesCS5D02G370800 , TraesCS5B02G364500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G398900 tetratricopeptide-like helical, putative, expressed -
2 Sobic.001G484500 - -
3 Sobic.003G336400 pentatricopeptide, putative, expressed -
4 Sobic.006G247400 transferase family protein, putative, expressed -
5 Sobic.010G258600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.002G246950 - -
7 Sobic.007G084400 - -
8 Sobic.009G160300 - -
9 Sobic.002G411700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.001G378150 - -
11 Sobic.005G142600 plant protein of unknown function domain containing protein, expressed -
12 Sobic.006G116600 anthranilate phosphoribosyltransferase, putative, expressed -
13 Sobic.001G300750 - -
14 Sobic.005G143000 expressed protein -
15 Sobic.005G048300 - -
16 Sobic.003G303800 tesmin/TSO1-like CXC domain containing protein, expressed -
17 Sobic.002G188000 receptor kinase, putative, expressed -
18 Sobic.001G278400 expressed protein -
19 Sobic.007G052500 - -
20 Sobic.008G049300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ECAGL2 - ECA1 gametogenesis related family protein precursor, expressed -


Gene co-expression network
sample Sobic005G161000 Sobic005G161000 Sobic003G398900 Sobic003G398900 Sobic005G161000--Sobic003G398900 Sobic001G484500 Sobic001G484500 Sobic005G161000--Sobic001G484500 Sobic003G336400 Sobic003G336400 Sobic005G161000--Sobic003G336400 Sobic006G247400 Sobic006G247400 Sobic005G161000--Sobic006G247400 Sobic010G258600 Sobic010G258600 Sobic005G161000--Sobic010G258600 Sobic002G246950 Sobic002G246950 Sobic005G161000--Sobic002G246950 Sobic007G084400 Sobic007G084400 Sobic005G161000--Sobic007G084400 Sobic009G160300 Sobic009G160300 Sobic005G161000--Sobic009G160300 Sobic002G411700 Sobic002G411700 Sobic005G161000--Sobic002G411700 Sobic003G398900--Sobic002G246950 Sobic003G398900--Sobic002G411700 Sobic003G398900--Sobic005G161000 Sobic003G398900--Sobic001G484500 Sobic003G398900--Sobic003G336400 Sobic003G303800 Sobic003G303800 Sobic003G398900--Sobic003G303800 Sobic002G060750 Sobic002G060750 Sobic003G398900--Sobic002G060750 Sobic003G398900--Sobic009G160300 Sobic006G116600 Sobic006G116600 Sobic003G398900--Sobic006G116600 Sobic001G484500--Sobic003G398900 Sobic001G484500--Sobic009G160300 Sobic007G052500 Sobic007G052500 Sobic001G484500--Sobic007G052500 Sobic001G484500--Sobic005G161000 Sobic001G484500--Sobic003G303800 Sobic001G484500--Sobic002G246950 Sobic001G283800 Sobic001G283800 Sobic001G484500--Sobic001G283800 Sobic001G484500--Sobic006G247400 Sobic001G278400 Sobic001G278400 Sobic001G484500--Sobic001G278400 Sobic003G336400--Sobic010G258600 Sobic003G336400--Sobic006G116600 Sobic001G378150 Sobic001G378150 Sobic003G336400--Sobic001G378150 Sobic003G336400--Sobic003G398900 Sobic001G177200 Sobic001G177200 Sobic003G336400--Sobic001G177200 Sobic003G013400 Sobic003G013400 Sobic003G336400--Sobic003G013400 Sobic002G149550 Sobic002G149550 Sobic003G336400--Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic003G336400--Sobic009G221701 Sobic002G429200 Sobic002G429200 Sobic003G336400--Sobic002G429200 Sobic001G448350 Sobic001G448350 Sobic006G247400--Sobic001G448350 Sobic001G048300 Sobic001G048300 Sobic006G247400--Sobic001G048300 Sobic007G085966 Sobic007G085966 Sobic006G247400--Sobic007G085966 Sobic006G247400--Sobic007G084400 Sobic006G247400--Sobic005G161000 Sobic003G123500 Sobic003G123500 Sobic006G247400--Sobic003G123500 Sobic005G008101 Sobic005G008101 Sobic006G247400--Sobic005G008101 Sobic004G201800 Sobic004G201800 Sobic006G247400--Sobic004G201800 Sobic005G017900 Sobic005G017900 Sobic006G247400--Sobic005G017900 Sobic010G258600--Sobic003G336400 Sobic005G008301 Sobic005G008301 Sobic010G258600--Sobic005G008301 Sobic002G171200 Sobic002G171200 Sobic010G258600--Sobic002G171200 Sobic010G258600--Sobic001G177200 Sobic010G069000 Sobic010G069000 Sobic010G258600--Sobic010G069000 Sobic002G264700 Sobic002G264700 Sobic010G258600--Sobic002G264700 Sobic010G258600--Sobic005G161000 Sobic010G258600--Sobic003G398900 Sobic010G258600--Sobic001G378150 Sobic002G246950--Sobic002G060750 Sobic002G246950--Sobic003G398900 Sobic003G018400 Sobic003G018400 Sobic002G246950--Sobic003G018400 Sobic002G246950--Sobic003G303800 Sobic002G246950--Sobic001G378150 Sobic002G246950--Sobic002G411700 Sobic002G285950 Sobic002G285950 Sobic002G246950--Sobic002G285950 Sobic002G246950--Sobic002G149550 Sobic007G094000 Sobic007G094000 Sobic002G246950--Sobic007G094000 Sobic003G159000 Sobic003G159000 Sobic007G084400--Sobic003G159000 Sobic007G084400--Sobic009G160300 Sobic005G048300 Sobic005G048300 Sobic007G084400--Sobic005G048300 Sobic003G137300 Sobic003G137300 Sobic007G084400--Sobic003G137300 Sobic007G084400--Sobic006G247400 Sobic007G084400--Sobic002G246950 Sobic007G084400--Sobic007G052500 Sobic001G540250 Sobic001G540250 Sobic007G084400--Sobic001G540250 Sobic003G194900 Sobic003G194900 Sobic007G084400--Sobic003G194900 Sobic009G160300--Sobic007G052500 Sobic008G039200 Sobic008G039200 Sobic009G160300--Sobic008G039200 Sobic001G089900 Sobic001G089900 Sobic009G160300--Sobic001G089900 Sobic010G154801 Sobic010G154801 Sobic009G160300--Sobic010G154801 Sobic003G253100 Sobic003G253100 Sobic009G160300--Sobic003G253100 Sobic010G277400 Sobic010G277400 Sobic009G160300--Sobic010G277400 Sobic009G160300--Sobic001G283800 Sobic009G209150 Sobic009G209150 Sobic009G160300--Sobic009G209150 Sobic009G160300--Sobic001G484500 Sobic002G411700--Sobic006G116600 Sobic002G411700--Sobic003G398900 Sobic001G104050 Sobic001G104050 Sobic002G411700--Sobic001G104050 Sobic001G296600 Sobic001G296600 Sobic002G411700--Sobic001G296600 Sobic010G217466 Sobic010G217466 Sobic002G411700--Sobic010G217466 Sobic002G411700--Sobic002G246950 Sobic002G411700--Sobic002G149550 Sobic007G044350 Sobic007G044350 Sobic002G411700--Sobic007G044350 Sobic004G060000 Sobic004G060000 Sobic002G411700--Sobic004G060000
Octagon: transcription factors


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