Gene annotation
Transcriptome id Sobic.003G054800.1
Synonym Sb03g004700
Functional annotation expressed protein
UniProt C5XNI0
Pfam PF03478
Panther DB PTHR33127 PTHR33127:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g21330.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G380000 THION28 - Plant thionin family protein precursor, expressed -
2 Sobic.006G018701 - -
3 Sobic.007G161100 ENTH domain containing protein, expressed -
4 Sobic.002G406801 - -
5 Sobic.006G066050 - -
6 Sobic.009G021000 exocyst complex component 6, putative, expressed -
7 Sobic.003G233800 serine/threonine-protein kinase, putative, expressed -
8 Sobic.004G059200 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.009G158300 - -
10 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
11 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
12 Sobic.006G077700 - -
13 Sobic.002G330200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
14 Sobic.010G026200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
15 Sobic.003G160600 uncharacterized protein At4g06744 precursor, putative, expressed -
16 Sobic.004G160000 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
17 Sobic.006G176200 OsSub43 - Putative Subtilisin homologue, expressed -
18 Sobic.007G139300 exostosin family domain containing protein, expressed -
19 Sobic.007G195000 cystathionin beta synthase protein, putative, expressed -
20 Sobic.002G021500 OsFBX209 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G054800 Sobic003G054800 Sobic001G380000 Sobic001G380000 Sobic003G054800--Sobic001G380000 Sobic006G018701 Sobic006G018701 Sobic003G054800--Sobic006G018701 Sobic007G161100 Sobic007G161100 Sobic003G054800--Sobic007G161100 Sobic002G406801 Sobic002G406801 Sobic003G054800--Sobic002G406801 Sobic006G066050 Sobic006G066050 Sobic003G054800--Sobic006G066050 Sobic009G021000 Sobic009G021000 Sobic003G054800--Sobic009G021000 Sobic003G233800 Sobic003G233800 Sobic003G054800--Sobic003G233800 Sobic004G059200 Sobic004G059200 Sobic003G054800--Sobic004G059200 Sobic009G158300 Sobic009G158300 Sobic003G054800--Sobic009G158300 Sobic001G380000--Sobic003G233800 Sobic001G513400 Sobic001G513400 Sobic001G380000--Sobic001G513400 Sobic010G187800 Sobic010G187800 Sobic001G380000--Sobic010G187800 Sobic001G380000--Sobic003G054800 Sobic004G289900 Sobic004G289900 Sobic001G380000--Sobic004G289900 Sobic001G036200 Sobic001G036200 Sobic001G380000--Sobic001G036200 Sobic002G405300 Sobic002G405300 Sobic001G380000--Sobic002G405300 Sobic006G176200 Sobic006G176200 Sobic001G380000--Sobic006G176200 Sobic007G080100 Sobic007G080100 Sobic001G380000--Sobic007G080100 Sobic006G018701--Sobic009G158300 Sobic003G160600 Sobic003G160600 Sobic006G018701--Sobic003G160600 Sobic001G392650 Sobic001G392650 Sobic006G018701--Sobic001G392650 Sobic002G049700 Sobic002G049700 Sobic006G018701--Sobic002G049700 Sobic003G343000 Sobic003G343000 Sobic006G018701--Sobic003G343000 Sobic006G018701--Sobic002G406801 Sobic004G327000 Sobic004G327000 Sobic006G018701--Sobic004G327000 Sobic009G060000 Sobic009G060000 Sobic006G018701--Sobic009G060000 Sobic003G343300 Sobic003G343300 Sobic006G018701--Sobic003G343300 Sobic007G161100--Sobic004G327000 Sobic007G161100--Sobic004G059200 Sobic007G161100--Sobic006G018701 Sobic010G026200 Sobic010G026200 Sobic007G161100--Sobic010G026200 Sobic005G039000 Sobic005G039000 Sobic007G161100--Sobic005G039000 Sobic001G196400 Sobic001G196400 Sobic007G161100--Sobic001G196400 Sobic004G160000 Sobic004G160000 Sobic007G161100--Sobic004G160000 Sobic003G208900 Sobic003G208900 Sobic007G161100--Sobic003G208900 Sobic007G161100--Sobic002G406801 Sobic002G406801--Sobic006G018701 Sobic002G406801--Sobic001G392650 Sobic002G330200 Sobic002G330200 Sobic002G406801--Sobic002G330200 Sobic002G021500 Sobic002G021500 Sobic002G406801--Sobic002G021500 Sobic002G406801--Sobic009G158300 Sobic002G406801--Sobic002G049700 Sobic002G406801--Sobic003G160600 Sobic002G406801--Sobic009G060000 Sobic002G406801--Sobic010G026200 Sobic006G066050--Sobic009G021000 Sobic006G066050--Sobic004G059200 Sobic006G066050--Sobic007G161100 Sobic009G042800 Sobic009G042800 Sobic006G066050--Sobic009G042800 Sobic006G066050--Sobic004G327000 Sobic006G066050--Sobic003G054800 Sobic002G087600 Sobic002G087600 Sobic006G066050--Sobic002G087600 Sobic006G066050--Sobic006G018701 Sobic009G125100 Sobic009G125100 Sobic006G066050--Sobic009G125100 Sobic009G021000--Sobic006G066050 Sobic009G021000--Sobic004G059200 Sobic009G021000--Sobic009G042800 Sobic009G021000--Sobic007G161100 Sobic009G021000--Sobic003G054800 Sobic009G021000--Sobic002G087600 Sobic009G021000--Sobic009G125100 Sobic009G021000--Sobic004G327000 Sobic009G021000--Sobic006G018701 Sobic003G233800--Sobic001G380000 Sobic003G233800--Sobic006G176200 Sobic007G222700 Sobic007G222700 Sobic003G233800--Sobic007G222700 Sobic007G061800 Sobic007G061800 Sobic003G233800--Sobic007G061800 Sobic009G227500 Sobic009G227500 Sobic003G233800--Sobic009G227500 Sobic004G091000 Sobic004G091000 Sobic003G233800--Sobic004G091000 Sobic006G173400 Sobic006G173400 Sobic003G233800--Sobic006G173400 Sobic006G234400 Sobic006G234400 Sobic003G233800--Sobic006G234400 Sobic010G177600 Sobic010G177600 Sobic003G233800--Sobic010G177600 Sobic004G059200--Sobic007G161100 Sobic004G059200--Sobic010G026200 Sobic004G059200--Sobic004G327000 Sobic004G059200--Sobic004G160000 Sobic004G059200--Sobic006G018701 Sobic004G059200--Sobic002G406801 Sobic004G059200--Sobic006G066050 Sobic009G103650 Sobic009G103650 Sobic004G059200--Sobic009G103650 Sobic004G059200--Sobic009G021000 Sobic009G158300--Sobic009G060000 Sobic009G158300--Sobic002G049700 Sobic009G158300--Sobic006G018701 Sobic009G158300--Sobic003G160600 Sobic009G158300--Sobic001G392650 Sobic009G158400 Sobic009G158400 Sobic009G158300--Sobic009G158400 Sobic003G445600 Sobic003G445600 Sobic009G158300--Sobic003G445600 Sobic008G134600 Sobic008G134600 Sobic009G158300--Sobic008G134600 Sobic001G409000 Sobic001G409000 Sobic009G158300--Sobic001G409000
Octagon: transcription factors


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