Gene annotation
Transcriptome id Sobic.003G089900.1
Synonym
Functional annotation seven in absentia protein family protein, putative, expressed
UniProt A0A1B6Q250
Pfam PF03145
Panther DB PTHR10315 PTHR10315:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37870 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g55640.1 : seven in absentia protein family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G056260.1
Wheat TraesCS3D02G504900 , TraesCS3B02G031200 , TraesCS3B02G560800 , TraesCS3B02G053400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G386350 - -
2 Sobic.007G220066 - -
3 Sobic.004G056100 expressed protein -
4 Sobic.002G105501 - -
5 Sobic.010G046200 NBS-LRR type disease resistance protein, putative, expressed -
6 Sobic.001G001066 - -
7 Sobic.009G066000 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.003G331550 - -
9 Sobic.007G172900 expressed protein -
10 Sobic.006G084701 - -
11 Sobic.007G139950 - -
12 Sobic.005G110550 - -
13 Sobic.006G115400 ZOS4-08 - C2H2 zinc finger protein, expressed -
14 Sobic.009G096566 - -
15 Sobic.003G162200 IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
16 Sobic.001G127600 ZOS3-15 - C2H2 zinc finger protein, expressed -
17 Sobic.005G151000 protein kinase domain containing protein, expressed -
18 Sobic.005G008700 pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.004G349500 membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.003G237700 - -


Gene co-expression network
sample Sobic003G089900 Sobic003G089900 Sobic003G386350 Sobic003G386350 Sobic003G089900--Sobic003G386350 Sobic007G220066 Sobic007G220066 Sobic003G089900--Sobic007G220066 Sobic004G056100 Sobic004G056100 Sobic003G089900--Sobic004G056100 Sobic002G105501 Sobic002G105501 Sobic003G089900--Sobic002G105501 Sobic010G046200 Sobic010G046200 Sobic003G089900--Sobic010G046200 Sobic001G001066 Sobic001G001066 Sobic003G089900--Sobic001G001066 Sobic009G066000 Sobic009G066000 Sobic003G089900--Sobic009G066000 Sobic003G331550 Sobic003G331550 Sobic003G089900--Sobic003G331550 Sobic007G172900 Sobic007G172900 Sobic003G089900--Sobic007G172900 Sobic003G386350--Sobic001G001066 Sobic003G386350--Sobic007G220066 Sobic003G386350--Sobic002G105501 Sobic003G386350--Sobic010G046200 Sobic003G386350--Sobic003G331550 Sobic003G386350--Sobic009G066000 Sobic007G139950 Sobic007G139950 Sobic003G386350--Sobic007G139950 Sobic009G244450 Sobic009G244450 Sobic003G386350--Sobic009G244450 Sobic009G096566 Sobic009G096566 Sobic003G386350--Sobic009G096566 Sobic007G220066--Sobic002G105501 Sobic007G220066--Sobic009G066000 Sobic007G220066--Sobic007G139950 Sobic007G220066--Sobic009G096566 Sobic006G115400 Sobic006G115400 Sobic007G220066--Sobic006G115400 Sobic007G220066--Sobic003G386350 Sobic004G349500 Sobic004G349500 Sobic007G220066--Sobic004G349500 Sobic007G220066--Sobic003G331550 Sobic007G220066--Sobic010G046200 Sobic004G056100--Sobic007G172900 Sobic004G056100--Sobic009G066000 Sobic004G056100--Sobic007G139950 Sobic004G056100--Sobic003G331550 Sobic004G056100--Sobic006G115400 Sobic004G056100--Sobic007G220066 Sobic004G056100--Sobic002G105501 Sobic002G341400 Sobic002G341400 Sobic004G056100--Sobic002G341400 Sobic005G008700 Sobic005G008700 Sobic004G056100--Sobic005G008700 Sobic002G105501--Sobic007G220066 Sobic002G105501--Sobic009G066000 Sobic002G105501--Sobic007G139950 Sobic002G105501--Sobic009G096566 Sobic002G105501--Sobic006G115400 Sobic002G105501--Sobic003G386350 Sobic002G105501--Sobic004G349500 Sobic002G105501--Sobic003G331550 Sobic002G105501--Sobic010G046200 Sobic010G046200--Sobic003G386350 Sobic010G046200--Sobic003G331550 Sobic010G046200--Sobic009G066000 Sobic010G046200--Sobic007G139950 Sobic010G046200--Sobic006G115400 Sobic010G046200--Sobic007G220066 Sobic010G046200--Sobic002G105501 Sobic010G046200--Sobic007G172900 Sobic010G046200--Sobic009G244450 Sobic003G242300 Sobic003G242300 Sobic001G001066--Sobic003G242300 Sobic001G001066--Sobic009G244450 Sobic001G001066--Sobic003G386350 Sobic001G137050 Sobic001G137050 Sobic001G001066--Sobic001G137050 Sobic003G440100 Sobic003G440100 Sobic001G001066--Sobic003G440100 Sobic005G137800 Sobic005G137800 Sobic001G001066--Sobic005G137800 Sobic002G223050 Sobic002G223050 Sobic001G001066--Sobic002G223050 Sobic001G250800 Sobic001G250800 Sobic001G001066--Sobic001G250800 Sobic003G318350 Sobic003G318350 Sobic001G001066--Sobic003G318350 Sobic009G066000--Sobic007G139950 Sobic009G066000--Sobic007G220066 Sobic009G066000--Sobic002G105501 Sobic009G066000--Sobic006G115400 Sobic009G066000--Sobic003G331550 Sobic003G162200 Sobic003G162200 Sobic009G066000--Sobic003G162200 Sobic009G066000--Sobic002G341400 Sobic009G066000--Sobic010G046200 Sobic009G066000--Sobic004G056100 Sobic003G331550--Sobic007G139950 Sobic003G331550--Sobic009G066000 Sobic003G331550--Sobic002G341400 Sobic003G331550--Sobic003G162200 Sobic003G331550--Sobic006G115400 Sobic003G049100 Sobic003G049100 Sobic003G331550--Sobic003G049100 Sobic003G331550--Sobic009G244450 Sobic007G141001 Sobic007G141001 Sobic003G331550--Sobic007G141001 Sobic003G331550--Sobic010G046200 Sobic007G172900--Sobic004G056100 Sobic007G172900--Sobic006G115400 Sobic007G172900--Sobic009G066000 Sobic007G172900--Sobic007G139950 Sobic007G172900--Sobic005G008700 Sobic007G172900--Sobic003G331550 Sobic007G172900--Sobic010G046200 Sobic007G172900--Sobic003G162200 Sobic007G172900--Sobic007G220066
Octagon: transcription factors


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