Gene annotation
Transcriptome id Sobic.003G091800.1,Sobic.003G091800.3,Sobic.003G091800.2
Synonym Sb03g007680
Functional annotation seven in absentia protein family protein, expressed
UniProt C5XE62
Pfam PF03145
Panther DB PTHR10315 PTHR10315:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G62800 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03170.1 : seven in absentia protein family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G272000 - -
2 Sobic.001G084133 - -
3 Sobic.004G089801 - -
4 Sobic.005G230900 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.002G221000 PHD-finger domain containing protein, putative, expressed -
6 Sobic.007G173400 - -
7 Sobic.008G026500 - -
8 Sobic.004G347833 - -
9 Sobic.001G005100 lipid binding protein, putative, expressed -
10 Sobic.002G365300 NBS-LRR type disease resistance protein, putative, expressed -
11 Sobic.008G109650 - -
12 Sobic.002G321000 - -
13 Sobic.008G176266 - -
14 Sobic.010G210400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
15 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.003G245000 expressed protein -
17 Sobic.003G390000 cytochrome P450, putative, expressed -
18 Sobic.002G033100 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.004G007166 - -
20 Sobic.001G208166 - -


Gene co-expression network
sample Sobic003G091800 Sobic003G091800 Sobic004G272000 Sobic004G272000 Sobic003G091800--Sobic004G272000 Sobic001G084133 Sobic001G084133 Sobic003G091800--Sobic001G084133 Sobic004G089801 Sobic004G089801 Sobic003G091800--Sobic004G089801 Sobic005G230900 Sobic005G230900 Sobic003G091800--Sobic005G230900 Sobic002G221000 Sobic002G221000 Sobic003G091800--Sobic002G221000 Sobic007G173400 Sobic007G173400 Sobic003G091800--Sobic007G173400 Sobic008G026500 Sobic008G026500 Sobic003G091800--Sobic008G026500 Sobic004G347833 Sobic004G347833 Sobic003G091800--Sobic004G347833 Sobic001G005100 Sobic001G005100 Sobic003G091800--Sobic001G005100 Sobic004G272000--Sobic008G026500 Sobic004G272000--Sobic004G089801 Sobic004G272000--Sobic001G084133 Sobic004G272000--Sobic005G230900 Sobic002G365300 Sobic002G365300 Sobic004G272000--Sobic002G365300 Sobic004G272000--Sobic002G221000 Sobic004G007166 Sobic004G007166 Sobic004G272000--Sobic004G007166 Sobic004G272000--Sobic001G005100 Sobic008G176266 Sobic008G176266 Sobic004G272000--Sobic008G176266 Sobic001G084133--Sobic004G089801 Sobic001G084133--Sobic005G230900 Sobic001G421450 Sobic001G421450 Sobic001G084133--Sobic001G421450 Sobic006G222200 Sobic006G222200 Sobic001G084133--Sobic006G222200 Sobic003G356500 Sobic003G356500 Sobic001G084133--Sobic003G356500 Sobic003G193900 Sobic003G193900 Sobic001G084133--Sobic003G193900 Sobic001G084133--Sobic004G272000 Sobic002G033100 Sobic002G033100 Sobic001G084133--Sobic002G033100 Sobic003G245000 Sobic003G245000 Sobic001G084133--Sobic003G245000 Sobic004G089801--Sobic001G084133 Sobic004G089801--Sobic004G272000 Sobic004G089801--Sobic001G005100 Sobic004G089801--Sobic003G356500 Sobic003G059500 Sobic003G059500 Sobic004G089801--Sobic003G059500 Sobic004G089801--Sobic002G365300 Sobic004G089801--Sobic006G222200 Sobic004G089801--Sobic005G230900 Sobic004G089801--Sobic002G033100 Sobic005G230900--Sobic001G084133 Sobic003G406120 Sobic003G406120 Sobic005G230900--Sobic003G406120 Sobic005G230900--Sobic004G272000 Sobic005G230900--Sobic004G089801 Sobic005G230900--Sobic008G026500 Sobic005G230900--Sobic002G365300 Sobic005G230900--Sobic001G421450 Sobic006G238900 Sobic006G238900 Sobic005G230900--Sobic006G238900 Sobic005G230900--Sobic003G245000 Sobic008G154500 Sobic008G154500 Sobic002G221000--Sobic008G154500 Sobic002G221000--Sobic004G272000 Sobic003G390000 Sobic003G390000 Sobic002G221000--Sobic003G390000 Sobic001G403900 Sobic001G403900 Sobic002G221000--Sobic001G403900 Sobic002G221000--Sobic001G005100 Sobic001G195866 Sobic001G195866 Sobic002G221000--Sobic001G195866 Sobic002G221000--Sobic008G176266 Sobic006G220100 Sobic006G220100 Sobic002G221000--Sobic006G220100 Sobic002G221000--Sobic008G026500 Sobic007G173400--Sobic004G347833 Sobic001G234766 Sobic001G234766 Sobic007G173400--Sobic001G234766 Sobic007G173400--Sobic004G272000 Sobic010G160850 Sobic010G160850 Sobic007G173400--Sobic010G160850 Sobic001G228500 Sobic001G228500 Sobic007G173400--Sobic001G228500 Sobic001G208166 Sobic001G208166 Sobic007G173400--Sobic001G208166 Sobic008G064200 Sobic008G064200 Sobic007G173400--Sobic008G064200 Sobic007G187500 Sobic007G187500 Sobic007G173400--Sobic007G187500 Sobic007G173400--Sobic004G089801 Sobic008G026500--Sobic004G272000 Sobic001G523050 Sobic001G523050 Sobic008G026500--Sobic001G523050 Sobic008G026500--Sobic002G365300 Sobic008G026500--Sobic005G230900 Sobic008G026500--Sobic008G176266 Sobic008G026500--Sobic002G221000 Sobic001G221700 Sobic001G221700 Sobic008G026500--Sobic001G221700 Sobic008G026500--Sobic004G089801 Sobic008G026500--Sobic001G005100 Sobic004G347833--Sobic007G173400 Sobic009G180900 Sobic009G180900 Sobic004G347833--Sobic009G180900 Sobic004G347833--Sobic007G187500 Sobic004G347833--Sobic008G064200 Sobic004G347833--Sobic004G272000 Sobic004G074400 Sobic004G074400 Sobic004G347833--Sobic004G074400 Sobic002G219100 Sobic002G219100 Sobic004G347833--Sobic002G219100 Sobic004G347833--Sobic001G228500 Sobic004G347833--Sobic001G234766 Sobic003G278800 Sobic003G278800 Sobic001G005100--Sobic003G278800 Sobic001G005100--Sobic002G033100 Sobic002G162900 Sobic002G162900 Sobic001G005100--Sobic002G162900 Sobic001G005100--Sobic001G403900 Sobic001G005100--Sobic006G222200 Sobic010G000401 Sobic010G000401 Sobic001G005100--Sobic010G000401 Sobic001G221750 Sobic001G221750 Sobic001G005100--Sobic001G221750 Sobic001G005100--Sobic004G089801 Sobic004G055400 Sobic004G055400 Sobic001G005100--Sobic004G055400
Octagon: transcription factors


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