Gene annotation
Transcriptome id Sobic.003G131900.1
Synonym Sb03g011250
Functional annotation expressed protein
UniProt A0A1B6Q2X1
Pfam PF05078
Panther DB PTHR31621 PTHR31621:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18425 : Protein of unknown function (DUF679)
RAP-DB (Rice) LOC_Os01g29240.1 : expressed protein
MaizeGDB (Corn) Zm00025a035202
Brachypodium -
Barley HORVU1Hr1G067430.1 , HORVU2Hr1G027720.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G444700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.003G192200 transporter family protein, putative, expressed -
3 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
4 Sobic.010G056900 - -
5 Sobic.002G102600 - -
6 Sobic.001G120800 - -
7 Sobic.005G098100 - -
8 Sobic.003G400700 CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.001G433500 expressed protein -
10 Sobic.005G001200 - -
11 Sobic.001G125600 - -
12 Sobic.006G130900 - -
13 Sobic.006G037100 expressed protein -
14 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
15 Sobic.003G166001 - -
16 Sobic.010G126300 - -
17 Sobic.001G160900 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
18 Sobic.002G160200 expressed protein -
19 Sobic.006G098900 pollen allergen Cyn d 23, putative, expressed -
20 Sobic.007G204800 receptor-like protein kinase 1, putative, expressed -


Gene co-expression network
sample Sobic003G131900 Sobic003G131900 Sobic003G444700 Sobic003G444700 Sobic003G131900--Sobic003G444700 Sobic003G192200 Sobic003G192200 Sobic003G131900--Sobic003G192200 Sobic010G257900 Sobic010G257900 Sobic003G131900--Sobic010G257900 Sobic010G056900 Sobic010G056900 Sobic003G131900--Sobic010G056900 Sobic002G102600 Sobic002G102600 Sobic003G131900--Sobic002G102600 Sobic001G120800 Sobic001G120800 Sobic003G131900--Sobic001G120800 Sobic005G098100 Sobic005G098100 Sobic003G131900--Sobic005G098100 Sobic003G400700 Sobic003G400700 Sobic003G131900--Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic003G131900--Sobic001G433500 Sobic003G444700--Sobic003G131900 Sobic003G444700--Sobic010G257900 Sobic003G444700--Sobic003G192200 Sobic003G444700--Sobic001G120800 Sobic003G444700--Sobic010G056900 Sobic006G130900 Sobic006G130900 Sobic003G444700--Sobic006G130900 Sobic003G444700--Sobic002G102600 Sobic003G444700--Sobic005G098100 Sobic001G125600 Sobic001G125600 Sobic003G444700--Sobic001G125600 Sobic003G192200--Sobic003G131900 Sobic003G192200--Sobic003G444700 Sobic003G192200--Sobic010G257900 Sobic003G192200--Sobic001G120800 Sobic003G192200--Sobic010G056900 Sobic003G192200--Sobic001G125600 Sobic003G192200--Sobic002G102600 Sobic003G192200--Sobic006G130900 Sobic001G160900 Sobic001G160900 Sobic003G192200--Sobic001G160900 Sobic010G257900--Sobic001G120800 Sobic010G257900--Sobic003G444700 Sobic010G257900--Sobic006G130900 Sobic010G257900--Sobic010G056900 Sobic010G257900--Sobic003G131900 Sobic007G204800 Sobic007G204800 Sobic010G257900--Sobic007G204800 Sobic010G257900--Sobic003G192200 Sobic010G257900--Sobic002G102600 Sobic010G257900--Sobic001G125600 Sobic010G056900--Sobic010G257900 Sobic010G056900--Sobic003G444700 Sobic010G056900--Sobic003G131900 Sobic010G056900--Sobic001G120800 Sobic010G056900--Sobic003G192200 Sobic010G056900--Sobic006G130900 Sobic010G056900--Sobic002G102600 Sobic010G056900--Sobic005G098100 Sobic010G056900--Sobic001G125600 Sobic002G102600--Sobic005G098100 Sobic002G160200 Sobic002G160200 Sobic002G102600--Sobic002G160200 Sobic002G102600--Sobic003G400700 Sobic002G102600--Sobic001G433500 Sobic006G037100 Sobic006G037100 Sobic002G102600--Sobic006G037100 Sobic005G001200 Sobic005G001200 Sobic002G102600--Sobic005G001200 Sobic003G287800 Sobic003G287800 Sobic002G102600--Sobic003G287800 Sobic002G102600--Sobic003G131900 Sobic002G102600--Sobic007G204800 Sobic001G120800--Sobic010G257900 Sobic001G120800--Sobic006G130900 Sobic001G120800--Sobic003G444700 Sobic001G120800--Sobic007G204800 Sobic001G120800--Sobic003G131900 Sobic001G120800--Sobic010G056900 Sobic001G120800--Sobic003G192200 Sobic001G120800--Sobic002G102600 Sobic004G240700 Sobic004G240700 Sobic001G120800--Sobic004G240700 Sobic005G098100--Sobic003G400700 Sobic005G098100--Sobic001G433500 Sobic005G098100--Sobic002G102600 Sobic005G098100--Sobic006G037100 Sobic003G166001 Sobic003G166001 Sobic005G098100--Sobic003G166001 Sobic006G098900 Sobic006G098900 Sobic005G098100--Sobic006G098900 Sobic005G098100--Sobic003G287800 Sobic008G080700 Sobic008G080700 Sobic005G098100--Sobic008G080700 Sobic008G131300 Sobic008G131300 Sobic005G098100--Sobic008G131300 Sobic003G400700--Sobic001G433500 Sobic003G400700--Sobic006G037100 Sobic003G400700--Sobic005G098100 Sobic003G400700--Sobic003G166001 Sobic003G400700--Sobic008G080700 Sobic003G400700--Sobic006G098900 Sobic003G400700--Sobic002G102600 Sobic003G400700--Sobic008G131300 Sobic002G122500 Sobic002G122500 Sobic003G400700--Sobic002G122500 Sobic001G433500--Sobic003G400700 Sobic001G433500--Sobic006G037100 Sobic001G433500--Sobic003G166001 Sobic001G433500--Sobic005G098100 Sobic001G433500--Sobic006G098900 Sobic001G433500--Sobic008G080700 Sobic001G433500--Sobic002G102600 Sobic001G433500--Sobic008G131300 Sobic001G433500--Sobic003G287800
Octagon: transcription factors


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