Gene annotation
Transcriptome id Sobic.003G192200.1
Synonym ATSTP1, Sb03g025600, STP1
Functional annotation transporter family protein, putative, expressed
UniProt C5XNP5
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF10
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G11260 : sugar transporter 1
RAP-DB (Rice) LOC_Os01g38670.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a000082 , Zm00025a030010 , Zm00025a034851 , Zm00025a046980 , Zm00025a048377 , Zm00025a028431 , Zm00025a044857 , Zm00025a050081 , Zm00025a015345
Brachypodium KQK24152 , KQK17831 , PNT72210 , KQJ90241 , KQK21214 , KQK15772
Barley HORVU7Hr1G019280.4 , HORVU7Hr1G019280.1 , HORVU5Hr1G055850.2 , HORVU5Hr1G055850.3 , HORVU5Hr1G055850.1 , HORVU3Hr1G018700.2 , HORVU3Hr1G018740.1 , HORVU7Hr1G019280.3 , HORVU3Hr1G018740.2 , HORVU3Hr1G018700.1 , HORVU3Hr1G102860.6 , HORVU3Hr1G102860.7 , HORVU3Hr1G102860.4 , HORVU3Hr1G102860.5 , HORVU3Hr1G102860.2 , HORVU3Hr1G102860.3 , HORVU3Hr1G102860.1 , HORVU6Hr1G025520.1 , HORVU5Hr1G065630.1 , HORVU5Hr1G065630.3 , HORVU5Hr1G065630.2 , HORVU5Hr1G065630.5 , HORVU5Hr1G065630.4 , HORVU5Hr1G065630.7 , HORVU5Hr1G065630.6 , HORVU5Hr1G000380.1 , HORVU7Hr1G019240.1 , HORVU7Hr1G069030.1 , HORVU7Hr1G069030.3 , HORVU7Hr1G069030.2 , HORVU7Hr1G069030.5 , HORVU7Hr1G069030.4 , HORVU5Hr1G054140.5 , HORVU5Hr1G054140.4 , HORVU5Hr1G054140.3 , HORVU5Hr1G054140.2 , HORVU5Hr1G054140.1
Wheat TraesCS3D02G470300 , TraesCS3B02G120300 , TraesCS5B02G001000 , TraesCS5D02G187100 , TraesCS5B02G225100 , TraesCS7B02G185800 , TraesCS2A02G205500 , TraesCS5B02G180800 , TraesCS7D02G286600 , TraesCS5D02G001600 , TraesCS3B02G518900 , TraesCS7A02G288800 , TraesCS2D02G264200 , TraesCS3D02G470200 , TraesCS5A02G001100 , TraesCS5A02G226500 , TraesCS5A02G182600 , TraesCS5D02G233900 , TraesCS2A02G259500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G131900 expressed protein -
2 Sobic.003G444700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
3 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
4 Sobic.001G120800 - -
5 Sobic.010G056900 - -
6 Sobic.001G125600 - -
7 Sobic.002G102600 - -
8 Sobic.006G130900 - -
9 Sobic.001G160900 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
10 Sobic.005G098100 - -
11 Sobic.003G400700 CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.005G001200 - -
13 Sobic.001G433500 expressed protein -
14 Sobic.007G204800 receptor-like protein kinase 1, putative, expressed -
15 Sobic.008G023801 - -
16 Sobic.002G160200 expressed protein -
17 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
18 Sobic.006G037100 expressed protein -
19 Sobic.010G126300 - -
20 Sobic.003G166001 - -


Gene co-expression network
sample Sobic003G192200 Sobic003G192200 Sobic003G131900 Sobic003G131900 Sobic003G192200--Sobic003G131900 Sobic003G444700 Sobic003G444700 Sobic003G192200--Sobic003G444700 Sobic010G257900 Sobic010G257900 Sobic003G192200--Sobic010G257900 Sobic001G120800 Sobic001G120800 Sobic003G192200--Sobic001G120800 Sobic010G056900 Sobic010G056900 Sobic003G192200--Sobic010G056900 Sobic001G125600 Sobic001G125600 Sobic003G192200--Sobic001G125600 Sobic002G102600 Sobic002G102600 Sobic003G192200--Sobic002G102600 Sobic006G130900 Sobic006G130900 Sobic003G192200--Sobic006G130900 Sobic001G160900 Sobic001G160900 Sobic003G192200--Sobic001G160900 Sobic003G131900--Sobic003G444700 Sobic003G131900--Sobic003G192200 Sobic003G131900--Sobic010G257900 Sobic003G131900--Sobic010G056900 Sobic003G131900--Sobic002G102600 Sobic003G131900--Sobic001G120800 Sobic005G098100 Sobic005G098100 Sobic003G131900--Sobic005G098100 Sobic003G400700 Sobic003G400700 Sobic003G131900--Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic003G131900--Sobic001G433500 Sobic003G444700--Sobic003G131900 Sobic003G444700--Sobic010G257900 Sobic003G444700--Sobic003G192200 Sobic003G444700--Sobic001G120800 Sobic003G444700--Sobic010G056900 Sobic003G444700--Sobic006G130900 Sobic003G444700--Sobic002G102600 Sobic003G444700--Sobic005G098100 Sobic003G444700--Sobic001G125600 Sobic010G257900--Sobic001G120800 Sobic010G257900--Sobic003G444700 Sobic010G257900--Sobic006G130900 Sobic010G257900--Sobic010G056900 Sobic010G257900--Sobic003G131900 Sobic007G204800 Sobic007G204800 Sobic010G257900--Sobic007G204800 Sobic010G257900--Sobic003G192200 Sobic010G257900--Sobic002G102600 Sobic010G257900--Sobic001G125600 Sobic001G120800--Sobic010G257900 Sobic001G120800--Sobic006G130900 Sobic001G120800--Sobic003G444700 Sobic001G120800--Sobic007G204800 Sobic001G120800--Sobic003G131900 Sobic001G120800--Sobic010G056900 Sobic001G120800--Sobic003G192200 Sobic001G120800--Sobic002G102600 Sobic004G240700 Sobic004G240700 Sobic001G120800--Sobic004G240700 Sobic010G056900--Sobic010G257900 Sobic010G056900--Sobic003G444700 Sobic010G056900--Sobic003G131900 Sobic010G056900--Sobic001G120800 Sobic010G056900--Sobic003G192200 Sobic010G056900--Sobic006G130900 Sobic010G056900--Sobic002G102600 Sobic010G056900--Sobic005G098100 Sobic010G056900--Sobic001G125600 Sobic001G125600--Sobic003G444700 Sobic001G125600--Sobic003G192200 Sobic001G125600--Sobic003G131900 Sobic001G125600--Sobic010G257900 Sobic001G125600--Sobic001G120800 Sobic001G125600--Sobic010G056900 Sobic001G125600--Sobic006G130900 Sobic001G125600--Sobic001G160900 Sobic001G125600--Sobic002G102600 Sobic002G102600--Sobic005G098100 Sobic002G160200 Sobic002G160200 Sobic002G102600--Sobic002G160200 Sobic002G102600--Sobic003G400700 Sobic002G102600--Sobic001G433500 Sobic006G037100 Sobic006G037100 Sobic002G102600--Sobic006G037100 Sobic005G001200 Sobic005G001200 Sobic002G102600--Sobic005G001200 Sobic003G287800 Sobic003G287800 Sobic002G102600--Sobic003G287800 Sobic002G102600--Sobic003G131900 Sobic002G102600--Sobic007G204800 Sobic006G130900--Sobic001G120800 Sobic006G130900--Sobic010G257900 Sobic006G130900--Sobic004G240700 Sobic006G130900--Sobic003G444700 Sobic010G015100 Sobic010G015100 Sobic006G130900--Sobic010G015100 Sobic003G315600 Sobic003G315600 Sobic006G130900--Sobic003G315600 Sobic005G072850 Sobic005G072850 Sobic006G130900--Sobic005G072850 Sobic006G130900--Sobic010G056900 Sobic006G130900--Sobic003G131900 Sobic001G160900--Sobic007G204800 Sobic001G160900--Sobic002G160200 Sobic004G338900 Sobic004G338900 Sobic001G160900--Sobic004G338900 Sobic001G160900--Sobic002G102600 Sobic005G125200 Sobic005G125200 Sobic001G160900--Sobic005G125200 Sobic006G099200 Sobic006G099200 Sobic001G160900--Sobic006G099200 Sobic001G160900--Sobic003G192200 Sobic001G160900--Sobic001G120800 Sobic001G160900--Sobic010G257900
Octagon: transcription factors


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