Gene annotation
Transcriptome id Sobic.003G315600.1,Sobic.003G315600.2
Synonym Sb03g036300
Functional annotation expressed protein
UniProt A0A1B6Q6F7 , C5XLN4
Pfam PF06136
Panther DB PTHR31083 PTHR31083:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05577 : Domain of unknown function (DUF966)
RAP-DB (Rice) LOC_Os01g57020.1 : expressed protein
MaizeGDB (Corn) Zm00025a027301
Brachypodium PNT72972 , KQK10046
Barley HORVU3Hr1G076430.1 , HORVU3Hr1G076430.2
Wheat TraesCS3B02G347200 , TraesCS3A02G318800 , TraesCS3A02G318800 , TraesCS3D02G312500 , TraesCS3D02G312500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G130900 - -
2 Sobic.004G240700 expressed protein -
3 Sobic.010G015100 expressed protein -
4 Sobic.001G120800 - -
5 Sobic.005G072850 - -
6 Sobic.009G118100 vacuolar calcium binding protein, putative, expressed -
7 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
8 Sobic.001G474001 - -
9 Sobic.002G125500 aquaporin protein, putative, expressed -
10 Sobic.009G111700 late embryogenesis abundant protein, putative, expressed -
11 Sobic.002G031301 - -
12 Sobic.003G444700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
13 Sobic.007G204800 receptor-like protein kinase 1, putative, expressed -
14 Sobic.007G119101 - -
15 Sobic.010G201100 expressed protein -
16 Sobic.003G192200 transporter family protein, putative, expressed -
17 Sobic.010G056900 - -
18 Sobic.003G226950 - -
19 Sobic.003G131900 expressed protein -
20 Sobic.001G125600 - -


Gene co-expression network
sample Sobic003G315600 Sobic003G315600 Sobic006G130900 Sobic006G130900 Sobic003G315600--Sobic006G130900 Sobic004G240700 Sobic004G240700 Sobic003G315600--Sobic004G240700 Sobic010G015100 Sobic010G015100 Sobic003G315600--Sobic010G015100 Sobic001G120800 Sobic001G120800 Sobic003G315600--Sobic001G120800 Sobic005G072850 Sobic005G072850 Sobic003G315600--Sobic005G072850 Sobic009G118100 Sobic009G118100 Sobic003G315600--Sobic009G118100 Sobic010G257900 Sobic010G257900 Sobic003G315600--Sobic010G257900 Sobic001G474001 Sobic001G474001 Sobic003G315600--Sobic001G474001 Sobic002G125500 Sobic002G125500 Sobic003G315600--Sobic002G125500 Sobic006G130900--Sobic001G120800 Sobic006G130900--Sobic010G257900 Sobic006G130900--Sobic004G240700 Sobic003G444700 Sobic003G444700 Sobic006G130900--Sobic003G444700 Sobic006G130900--Sobic010G015100 Sobic006G130900--Sobic003G315600 Sobic006G130900--Sobic005G072850 Sobic010G056900 Sobic010G056900 Sobic006G130900--Sobic010G056900 Sobic003G131900 Sobic003G131900 Sobic006G130900--Sobic003G131900 Sobic004G240700--Sobic002G125500 Sobic004G240700--Sobic006G130900 Sobic004G240700--Sobic010G015100 Sobic004G240700--Sobic005G072850 Sobic009G111700 Sobic009G111700 Sobic004G240700--Sobic009G111700 Sobic002G031301 Sobic002G031301 Sobic004G240700--Sobic002G031301 Sobic003G226950 Sobic003G226950 Sobic004G240700--Sobic003G226950 Sobic010G201100 Sobic010G201100 Sobic004G240700--Sobic010G201100 Sobic007G119101 Sobic007G119101 Sobic004G240700--Sobic007G119101 Sobic010G015100--Sobic005G072850 Sobic010G015100--Sobic002G031301 Sobic010G015100--Sobic004G240700 Sobic010G015100--Sobic009G111700 Sobic010G015100--Sobic007G119101 Sobic010G015100--Sobic006G130900 Sobic010G015100--Sobic010G201100 Sobic010G015100--Sobic002G125500 Sobic010G015100--Sobic003G315600 Sobic001G120800--Sobic010G257900 Sobic001G120800--Sobic006G130900 Sobic001G120800--Sobic003G444700 Sobic007G204800 Sobic007G204800 Sobic001G120800--Sobic007G204800 Sobic001G120800--Sobic003G131900 Sobic001G120800--Sobic010G056900 Sobic003G192200 Sobic003G192200 Sobic001G120800--Sobic003G192200 Sobic002G102600 Sobic002G102600 Sobic001G120800--Sobic002G102600 Sobic001G120800--Sobic004G240700 Sobic005G072850--Sobic010G015100 Sobic005G072850--Sobic002G031301 Sobic005G072850--Sobic007G119101 Sobic005G072850--Sobic009G111700 Sobic005G072850--Sobic010G201100 Sobic005G072850--Sobic004G240700 Sobic005G072850--Sobic002G125500 Sobic005G072850--Sobic003G226950 Sobic005G072850--Sobic006G130900 Sobic009G118100--Sobic003G315600 Sobic009G118100--Sobic001G474001 Sobic009G118100--Sobic001G120800 Sobic009G118100--Sobic010G257900 Sobic009G118100--Sobic003G444700 Sobic009G118100--Sobic007G204800 Sobic009G118100--Sobic003G131900 Sobic009G118100--Sobic006G130900 Sobic009G118100--Sobic002G102600 Sobic010G257900--Sobic001G120800 Sobic010G257900--Sobic003G444700 Sobic010G257900--Sobic006G130900 Sobic010G257900--Sobic010G056900 Sobic010G257900--Sobic003G131900 Sobic010G257900--Sobic007G204800 Sobic010G257900--Sobic003G192200 Sobic010G257900--Sobic002G102600 Sobic001G125600 Sobic001G125600 Sobic010G257900--Sobic001G125600 Sobic001G474001--Sobic009G118100 Sobic001G474001--Sobic003G315600 Sobic001G474001--Sobic007G204800 Sobic001G474001--Sobic001G120800 Sobic001G474001--Sobic010G257900 Sobic001G474001--Sobic006G130900 Sobic006G099200 Sobic006G099200 Sobic001G474001--Sobic006G099200 Sobic002G160200 Sobic002G160200 Sobic001G474001--Sobic002G160200 Sobic001G474001--Sobic002G102600 Sobic002G125500--Sobic003G226950 Sobic002G125500--Sobic004G240700 Sobic002G125500--Sobic009G111700 Sobic002G125500--Sobic002G031301 Sobic002G125500--Sobic010G201100 Sobic002G125500--Sobic005G072850 Sobic002G125500--Sobic007G119101 Sobic007G025350 Sobic007G025350 Sobic002G125500--Sobic007G025350 Sobic002G125500--Sobic010G015100
Octagon: transcription factors


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