Gene annotation
Transcriptome id Sobic.009G118100.1
Synonym Sb09g018580
Functional annotation vacuolar calcium binding protein, putative, expressed
UniProt C5YX92
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g71040.1 : expressed protein
MaizeGDB (Corn) Zm00025a037655
Brachypodium -
Barley -
Wheat TraesCS1D02G236100
Populus -


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cDNA sequences
Sobic.009G118100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G315600 expressed protein -
2 Sobic.001G474001 - -
3 Sobic.001G120800 - -
4 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
5 Sobic.003G444700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
6 Sobic.007G204800 receptor-like protein kinase 1, putative, expressed -
7 Sobic.003G131900 expressed protein -
8 Sobic.006G130900 - -
9 Sobic.002G102600 - -
10 Sobic.003G192200 transporter family protein, putative, expressed -
11 Sobic.010G056900 - -
12 Sobic.005G098100 - -
13 Sobic.002G160200 expressed protein -
14 Sobic.005G001200 - -
15 Sobic.001G160900 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
16 Sobic.003G400700 CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.001G433500 expressed protein -
18 Sobic.004G338900 P21-Rho-binding domain containing protein, putative, expressed -
19 Sobic.010G070100 serine threonine kinase, putative, expressed -
20 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic009G118100 Sobic009G118100 Sobic003G315600 Sobic003G315600 Sobic009G118100--Sobic003G315600 Sobic001G474001 Sobic001G474001 Sobic009G118100--Sobic001G474001 Sobic001G120800 Sobic001G120800 Sobic009G118100--Sobic001G120800 Sobic010G257900 Sobic010G257900 Sobic009G118100--Sobic010G257900 Sobic003G444700 Sobic003G444700 Sobic009G118100--Sobic003G444700 Sobic007G204800 Sobic007G204800 Sobic009G118100--Sobic007G204800 Sobic003G131900 Sobic003G131900 Sobic009G118100--Sobic003G131900 Sobic006G130900 Sobic006G130900 Sobic009G118100--Sobic006G130900 Sobic002G102600 Sobic002G102600 Sobic009G118100--Sobic002G102600 Sobic003G315600--Sobic006G130900 Sobic004G240700 Sobic004G240700 Sobic003G315600--Sobic004G240700 Sobic010G015100 Sobic010G015100 Sobic003G315600--Sobic010G015100 Sobic003G315600--Sobic001G120800 Sobic005G072850 Sobic005G072850 Sobic003G315600--Sobic005G072850 Sobic003G315600--Sobic009G118100 Sobic003G315600--Sobic010G257900 Sobic003G315600--Sobic001G474001 Sobic002G125500 Sobic002G125500 Sobic003G315600--Sobic002G125500 Sobic001G474001--Sobic009G118100 Sobic001G474001--Sobic003G315600 Sobic001G474001--Sobic007G204800 Sobic001G474001--Sobic001G120800 Sobic001G474001--Sobic010G257900 Sobic001G474001--Sobic006G130900 Sobic006G099200 Sobic006G099200 Sobic001G474001--Sobic006G099200 Sobic002G160200 Sobic002G160200 Sobic001G474001--Sobic002G160200 Sobic001G474001--Sobic002G102600 Sobic001G120800--Sobic010G257900 Sobic001G120800--Sobic006G130900 Sobic001G120800--Sobic003G444700 Sobic001G120800--Sobic007G204800 Sobic001G120800--Sobic003G131900 Sobic010G056900 Sobic010G056900 Sobic001G120800--Sobic010G056900 Sobic003G192200 Sobic003G192200 Sobic001G120800--Sobic003G192200 Sobic001G120800--Sobic002G102600 Sobic001G120800--Sobic004G240700 Sobic010G257900--Sobic001G120800 Sobic010G257900--Sobic003G444700 Sobic010G257900--Sobic006G130900 Sobic010G257900--Sobic010G056900 Sobic010G257900--Sobic003G131900 Sobic010G257900--Sobic007G204800 Sobic010G257900--Sobic003G192200 Sobic010G257900--Sobic002G102600 Sobic001G125600 Sobic001G125600 Sobic010G257900--Sobic001G125600 Sobic003G444700--Sobic003G131900 Sobic003G444700--Sobic010G257900 Sobic003G444700--Sobic003G192200 Sobic003G444700--Sobic001G120800 Sobic003G444700--Sobic010G056900 Sobic003G444700--Sobic006G130900 Sobic003G444700--Sobic002G102600 Sobic005G098100 Sobic005G098100 Sobic003G444700--Sobic005G098100 Sobic003G444700--Sobic001G125600 Sobic007G204800--Sobic002G160200 Sobic004G338900 Sobic004G338900 Sobic007G204800--Sobic004G338900 Sobic007G204800--Sobic006G099200 Sobic001G160900 Sobic001G160900 Sobic007G204800--Sobic001G160900 Sobic007G204800--Sobic001G120800 Sobic007G204800--Sobic002G102600 Sobic007G204800--Sobic010G257900 Sobic005G027250 Sobic005G027250 Sobic007G204800--Sobic005G027250 Sobic002G083100 Sobic002G083100 Sobic007G204800--Sobic002G083100 Sobic003G131900--Sobic003G444700 Sobic003G131900--Sobic003G192200 Sobic003G131900--Sobic010G257900 Sobic003G131900--Sobic010G056900 Sobic003G131900--Sobic002G102600 Sobic003G131900--Sobic001G120800 Sobic003G131900--Sobic005G098100 Sobic003G400700 Sobic003G400700 Sobic003G131900--Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic003G131900--Sobic001G433500 Sobic006G130900--Sobic001G120800 Sobic006G130900--Sobic010G257900 Sobic006G130900--Sobic004G240700 Sobic006G130900--Sobic003G444700 Sobic006G130900--Sobic010G015100 Sobic006G130900--Sobic003G315600 Sobic006G130900--Sobic005G072850 Sobic006G130900--Sobic010G056900 Sobic006G130900--Sobic003G131900 Sobic002G102600--Sobic005G098100 Sobic002G102600--Sobic002G160200 Sobic002G102600--Sobic003G400700 Sobic002G102600--Sobic001G433500 Sobic006G037100 Sobic006G037100 Sobic002G102600--Sobic006G037100 Sobic005G001200 Sobic005G001200 Sobic002G102600--Sobic005G001200 Sobic003G287800 Sobic003G287800 Sobic002G102600--Sobic003G287800 Sobic002G102600--Sobic003G131900 Sobic002G102600--Sobic007G204800
Octagon: transcription factors


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