Gene annotation
Transcriptome id Sobic.004G240700.1
Synonym Sb04g028150
Functional annotation expressed protein
UniProt C5XYV3
Pfam -
Panther DB PTHR33971
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29075 : glycine-rich protein
RAP-DB (Rice) LOC_Os02g50980.1 : expressed protein
MaizeGDB (Corn) Zm00025a022022
Brachypodium -
Barley HORVU6Hr1G076060.4 , HORVU6Hr1G076060.3 , HORVU6Hr1G076060.2
Wheat TraesCS6D02G287600 , TraesCS6A02G308400 , TraesCS6B02G337100
Populus -


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cDNA sequences
Sobic.004G240700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G125500 aquaporin protein, putative, expressed -
2 Sobic.006G130900 - -
3 Sobic.010G015100 expressed protein -
4 Sobic.005G072850 - -
5 Sobic.009G111700 late embryogenesis abundant protein, putative, expressed -
6 Sobic.002G031301 - -
7 Sobic.003G226950 - -
8 Sobic.010G201100 expressed protein -
9 Sobic.007G119101 - -
10 Sobic.003G315600 expressed protein -
11 Sobic.001G120800 - -
12 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
13 Sobic.003G444700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
14 Sobic.007G025350 - -
15 Sobic.010G056900 - -
16 Sobic.009G044501 - -
17 Sobic.001G263801 - -
18 Sobic.003G192200 transporter family protein, putative, expressed -
19 Sobic.002G005500 dirigent, putative, expressed -
20 Sobic.003G131900 expressed protein -


Gene co-expression network
sample Sobic004G240700 Sobic004G240700 Sobic002G125500 Sobic002G125500 Sobic004G240700--Sobic002G125500 Sobic006G130900 Sobic006G130900 Sobic004G240700--Sobic006G130900 Sobic010G015100 Sobic010G015100 Sobic004G240700--Sobic010G015100 Sobic005G072850 Sobic005G072850 Sobic004G240700--Sobic005G072850 Sobic009G111700 Sobic009G111700 Sobic004G240700--Sobic009G111700 Sobic002G031301 Sobic002G031301 Sobic004G240700--Sobic002G031301 Sobic003G226950 Sobic003G226950 Sobic004G240700--Sobic003G226950 Sobic010G201100 Sobic010G201100 Sobic004G240700--Sobic010G201100 Sobic007G119101 Sobic007G119101 Sobic004G240700--Sobic007G119101 Sobic002G125500--Sobic003G226950 Sobic002G125500--Sobic004G240700 Sobic002G125500--Sobic009G111700 Sobic002G125500--Sobic002G031301 Sobic002G125500--Sobic010G201100 Sobic002G125500--Sobic005G072850 Sobic002G125500--Sobic007G119101 Sobic007G025350 Sobic007G025350 Sobic002G125500--Sobic007G025350 Sobic002G125500--Sobic010G015100 Sobic001G120800 Sobic001G120800 Sobic006G130900--Sobic001G120800 Sobic010G257900 Sobic010G257900 Sobic006G130900--Sobic010G257900 Sobic006G130900--Sobic004G240700 Sobic003G444700 Sobic003G444700 Sobic006G130900--Sobic003G444700 Sobic006G130900--Sobic010G015100 Sobic003G315600 Sobic003G315600 Sobic006G130900--Sobic003G315600 Sobic006G130900--Sobic005G072850 Sobic010G056900 Sobic010G056900 Sobic006G130900--Sobic010G056900 Sobic003G131900 Sobic003G131900 Sobic006G130900--Sobic003G131900 Sobic010G015100--Sobic005G072850 Sobic010G015100--Sobic002G031301 Sobic010G015100--Sobic004G240700 Sobic010G015100--Sobic009G111700 Sobic010G015100--Sobic007G119101 Sobic010G015100--Sobic006G130900 Sobic010G015100--Sobic010G201100 Sobic010G015100--Sobic002G125500 Sobic010G015100--Sobic003G315600 Sobic005G072850--Sobic010G015100 Sobic005G072850--Sobic002G031301 Sobic005G072850--Sobic007G119101 Sobic005G072850--Sobic009G111700 Sobic005G072850--Sobic010G201100 Sobic005G072850--Sobic004G240700 Sobic005G072850--Sobic002G125500 Sobic005G072850--Sobic003G226950 Sobic005G072850--Sobic006G130900 Sobic009G111700--Sobic002G031301 Sobic009G111700--Sobic007G119101 Sobic009G111700--Sobic010G201100 Sobic009G111700--Sobic005G072850 Sobic009G111700--Sobic002G125500 Sobic009G111700--Sobic010G015100 Sobic009G111700--Sobic003G226950 Sobic009G111700--Sobic004G240700 Sobic002G005500 Sobic002G005500 Sobic009G111700--Sobic002G005500 Sobic002G031301--Sobic010G201100 Sobic002G031301--Sobic007G119101 Sobic002G031301--Sobic005G072850 Sobic002G031301--Sobic009G111700 Sobic002G031301--Sobic010G015100 Sobic002G031301--Sobic002G125500 Sobic002G031301--Sobic003G226950 Sobic002G031301--Sobic004G240700 Sobic002G031301--Sobic007G025350 Sobic003G226950--Sobic002G125500 Sobic003G226950--Sobic007G025350 Sobic001G263801 Sobic001G263801 Sobic003G226950--Sobic001G263801 Sobic003G226950--Sobic009G111700 Sobic003G226950--Sobic010G201100 Sobic003G226950--Sobic002G005500 Sobic003G226950--Sobic002G031301 Sobic003G226950--Sobic007G119101 Sobic003G226950--Sobic004G240700 Sobic010G201100--Sobic002G031301 Sobic010G201100--Sobic007G119101 Sobic010G201100--Sobic009G111700 Sobic010G201100--Sobic005G072850 Sobic010G201100--Sobic002G125500 Sobic010G201100--Sobic003G226950 Sobic010G201100--Sobic007G025350 Sobic010G201100--Sobic010G015100 Sobic010G201100--Sobic001G263801 Sobic007G119101--Sobic002G031301 Sobic007G119101--Sobic010G201100 Sobic007G119101--Sobic009G111700 Sobic007G119101--Sobic005G072850 Sobic007G119101--Sobic010G015100 Sobic007G119101--Sobic002G125500 Sobic007G119101--Sobic003G226950 Sobic007G119101--Sobic007G025350 Sobic007G119101--Sobic002G005500
Octagon: transcription factors


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