Gene annotation
Transcriptome id Sobic.004G147600.1
Synonym Sb04g019570
Functional annotation U-box domain-containing protein, putative, expressed
UniProt A0A194YQX4
Pfam PF04564
Panther DB PTHR22849 PTHR22849:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G71020 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os02g28870.1 : U-box domain-containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ99510 , KQJ99511 , PNT68642
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G298200 - -
2 Sobic.010G122900 cadmium tolerance factor, putative, expressed -
3 Sobic.006G004800 expressed protein -
4 Sobic.005G098501 - -
5 Sobic.008G163750 - -
6 Sobic.001G010000 pentatricopeptide, putative, expressed -
7 Sobic.003G154900 - -
8 Sobic.002G084200 - -
9 Sobic.009G242900 expressed protein -
10 Sobic.006G266900 polygalacturonase inhibitor 3 precursor, putative, expressed -
11 Sobic.001G310133 - -
12 Sobic.005G214900 cytochrome P450, putative, expressed -
13 Sobic.002G156800 expressed protein -
14 Sobic.002G017100 OsFBL33 - F-box domain and LRR containing protein, expressed -
15 Sobic.003G021000 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
16 Sobic.010G098700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K10773: endonuclease III
17 Sobic.010G200600 nitrate-induced NOI protein, expressed -
18 Sobic.001G311800 phosphate-induced protein 1 conserved region domain containing protein, expressed -
19 Sobic.005G122600 IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
20 Sobic.005G035850 - -


Gene co-expression network
sample Sobic004G147600 Sobic004G147600 Sobic001G298200 Sobic001G298200 Sobic004G147600--Sobic001G298200 Sobic010G122900 Sobic010G122900 Sobic004G147600--Sobic010G122900 Sobic006G004800 Sobic006G004800 Sobic004G147600--Sobic006G004800 Sobic005G098501 Sobic005G098501 Sobic004G147600--Sobic005G098501 Sobic008G163750 Sobic008G163750 Sobic004G147600--Sobic008G163750 Sobic001G010000 Sobic001G010000 Sobic004G147600--Sobic001G010000 Sobic003G154900 Sobic003G154900 Sobic004G147600--Sobic003G154900 Sobic002G084200 Sobic002G084200 Sobic004G147600--Sobic002G084200 Sobic009G242900 Sobic009G242900 Sobic004G147600--Sobic009G242900 Sobic010G068051 Sobic010G068051 Sobic001G298200--Sobic010G068051 Sobic009G064700 Sobic009G064700 Sobic001G298200--Sobic009G064700 Sobic006G031866 Sobic006G031866 Sobic001G298200--Sobic006G031866 Sobic001G463700 Sobic001G463700 Sobic001G298200--Sobic001G463700 Sobic001G135000 Sobic001G135000 Sobic001G298200--Sobic001G135000 Sobic002G028901 Sobic002G028901 Sobic001G298200--Sobic002G028901 Sobic007G171300 Sobic007G171300 Sobic001G298200--Sobic007G171300 Sobic001G298200--Sobic004G147600 Sobic003G193400 Sobic003G193400 Sobic001G298200--Sobic003G193400 Sobic001G258500 Sobic001G258500 Sobic010G122900--Sobic001G258500 Sobic008G181701 Sobic008G181701 Sobic010G122900--Sobic008G181701 Sobic008G175966 Sobic008G175966 Sobic010G122900--Sobic008G175966 Sobic009G172300 Sobic009G172300 Sobic010G122900--Sobic009G172300 Sobic002G045900 Sobic002G045900 Sobic010G122900--Sobic002G045900 Sobic006G062466 Sobic006G062466 Sobic010G122900--Sobic006G062466 Sobic006G257250 Sobic006G257250 Sobic010G122900--Sobic006G257250 Sobic004G056350 Sobic004G056350 Sobic010G122900--Sobic004G056350 Sobic004G311550 Sobic004G311550 Sobic010G122900--Sobic004G311550 Sobic006G004800--Sobic008G181701 Sobic001G056000 Sobic001G056000 Sobic006G004800--Sobic001G056000 Sobic006G004800--Sobic001G258500 Sobic006G004800--Sobic010G122900 SobicK044420 SobicK044420 Sobic006G004800--SobicK044420 Sobic007G069900 Sobic007G069900 Sobic006G004800--Sobic007G069900 Sobic010G081300 Sobic010G081300 Sobic006G004800--Sobic010G081300 Sobic009G220400 Sobic009G220400 Sobic006G004800--Sobic009G220400 Sobic006G004800--Sobic006G062466 Sobic002G156800 Sobic002G156800 Sobic005G098501--Sobic002G156800 Sobic002G017100 Sobic002G017100 Sobic005G098501--Sobic002G017100 Sobic005G098501--Sobic003G154900 Sobic005G098501--Sobic002G084200 Sobic003G411500 Sobic003G411500 Sobic005G098501--Sobic003G411500 Sobic002G221500 Sobic002G221500 Sobic005G098501--Sobic002G221500 Sobic010G200600 Sobic010G200600 Sobic005G098501--Sobic010G200600 Sobic010G180350 Sobic010G180350 Sobic005G098501--Sobic010G180350 Sobic003G014832 Sobic003G014832 Sobic005G098501--Sobic003G014832 Sobic005G035850 Sobic005G035850 Sobic008G163750--Sobic005G035850 Sobic003G003900 Sobic003G003900 Sobic008G163750--Sobic003G003900 Sobic005G214900 Sobic005G214900 Sobic008G163750--Sobic005G214900 Sobic001G310133 Sobic001G310133 Sobic008G163750--Sobic001G310133 Sobic002G113066 Sobic002G113066 Sobic008G163750--Sobic002G113066 Sobic004G139800 Sobic004G139800 Sobic008G163750--Sobic004G139800 Sobic003G077001 Sobic003G077001 Sobic008G163750--Sobic003G077001 Sobic008G098032 Sobic008G098032 Sobic008G163750--Sobic008G098032 Sobic004G019250 Sobic004G019250 Sobic008G163750--Sobic004G019250 Sobic001G010000--Sobic004G147600 Sobic006G266900 Sobic006G266900 Sobic001G010000--Sobic006G266900 Sobic001G010000--Sobic010G122900 Sobic002G257600 Sobic002G257600 Sobic001G010000--Sobic002G257600 Sobic007G216401 Sobic007G216401 Sobic001G010000--Sobic007G216401 Sobic001G311800 Sobic001G311800 Sobic001G010000--Sobic001G311800 Sobic002G239800 Sobic002G239800 Sobic001G010000--Sobic002G239800 Sobic001G010000--Sobic001G298200 Sobic001G256400 Sobic001G256400 Sobic001G010000--Sobic001G256400 Sobic003G154900--Sobic002G156800 Sobic003G154900--Sobic002G084200 Sobic003G154900--Sobic010G200600 Sobic003G154900--Sobic002G017100 Sobic003G154900--Sobic002G221500 Sobic004G218200 Sobic004G218200 Sobic003G154900--Sobic004G218200 Sobic003G403000 Sobic003G403000 Sobic003G154900--Sobic003G403000 Sobic003G154900--Sobic003G411500 Sobic009G258700 Sobic009G258700 Sobic003G154900--Sobic009G258700 Sobic002G084200--Sobic002G156800 Sobic002G084200--Sobic003G154900 Sobic002G084200--Sobic010G200600 Sobic002G084200--Sobic002G221500 Sobic002G084200--Sobic009G258700 Sobic002G084200--Sobic002G017100 Sobic002G084200--Sobic004G218200 Sobic002G084200--Sobic003G411500 Sobic002G084200--Sobic003G014832 Sobic003G108401 Sobic003G108401 Sobic009G242900--Sobic003G108401 Sobic009G163000 Sobic009G163000 Sobic009G242900--Sobic009G163000 Sobic006G128450 Sobic006G128450 Sobic009G242900--Sobic006G128450 Sobic010G164600 Sobic010G164600 Sobic009G242900--Sobic010G164600 Sobic009G242900--Sobic003G003900 Sobic009G242900--Sobic005G214900 Sobic009G242900--Sobic001G310133 Sobic010G034700 Sobic010G034700 Sobic009G242900--Sobic010G034700 Sobic009G242900--Sobic008G163750
Octagon: transcription factors


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