Gene annotation
Transcriptome id Sobic.006G266900.1
Synonym Sb06g032910
Functional annotation polygalacturonase inhibitor 3 precursor, putative, expressed
UniProt A0A1B6PP50
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF102
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G23400 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os04g58080.1 : polygalacturonase inhibitor 3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a057381
Brachypodium -
Barley -
Wheat TraesCS3A02G276200 , TraesCS3A02G276200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G216401 - -
2 Sobic.007G152701 - -
3 Sobic.010G236950 - -
4 Sobic.003G033400 3-5 exonuclease domain-containing protein, putative, expressed -
5 Sobic.010G263051 - -
6 Sobic.010G116200 bZIP transcription factor domain containing protein, expressed -
7 Sobic.007G048000 - -
8 Sobic.007G069900 expressed protein -
9 Sobic.006G037050 - -
10 Sobic.003G193400 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.002G142550 - -
12 Sobic.010G180300 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.005G217400 AP2 domain containing protein, expressed -
14 Sobic.001G463700 - -
15 Sobic.001G310400 expressed protein -
16 Sobic.010G122900 cadmium tolerance factor, putative, expressed -
17 Sobic.006G024101 - -
18 Sobic.003G294550 - -
19 Sobic.009G220400 glyoxal oxidase-related, putative, expressed -
20 Sobic.K044420 - -


Gene co-expression network
sample Sobic006G266900 Sobic006G266900 Sobic007G216401 Sobic007G216401 Sobic006G266900--Sobic007G216401 Sobic007G152701 Sobic007G152701 Sobic006G266900--Sobic007G152701 Sobic010G236950 Sobic010G236950 Sobic006G266900--Sobic010G236950 Sobic003G033400 Sobic003G033400 Sobic006G266900--Sobic003G033400 Sobic010G263051 Sobic010G263051 Sobic006G266900--Sobic010G263051 Sobic010G116200 Sobic010G116200 Sobic006G266900--Sobic010G116200 Sobic007G048000 Sobic007G048000 Sobic006G266900--Sobic007G048000 Sobic007G069900 Sobic007G069900 Sobic006G266900--Sobic007G069900 Sobic006G037050 Sobic006G037050 Sobic006G266900--Sobic006G037050 Sobic001G476201 Sobic001G476201 Sobic007G216401--Sobic001G476201 Sobic007G216401--Sobic006G266900 Sobic002G045900 Sobic002G045900 Sobic007G216401--Sobic002G045900 Sobic003G324900 Sobic003G324900 Sobic007G216401--Sobic003G324900 Sobic006G024101 Sobic006G024101 Sobic007G216401--Sobic006G024101 Sobic003G294550 Sobic003G294550 Sobic007G216401--Sobic003G294550 Sobic007G216401--Sobic010G263051 Sobic010G180300 Sobic010G180300 Sobic007G216401--Sobic010G180300 Sobic007G216401--Sobic010G116200 Sobic007G152701--Sobic010G236950 Sobic007G152701--Sobic010G263051 Sobic010G165925 Sobic010G165925 Sobic007G152701--Sobic010G165925 Sobic007G003250 Sobic007G003250 Sobic007G152701--Sobic007G003250 Sobic001G369701 Sobic001G369701 Sobic007G152701--Sobic001G369701 Sobic003G199650 Sobic003G199650 Sobic007G152701--Sobic003G199650 Sobic005G107250 Sobic005G107250 Sobic007G152701--Sobic005G107250 Sobic002G142550 Sobic002G142550 Sobic007G152701--Sobic002G142550 Sobic001G355850 Sobic001G355850 Sobic007G152701--Sobic001G355850 Sobic010G236950--Sobic002G142550 Sobic010G236950--Sobic005G107250 Sobic010G236950--Sobic010G263051 Sobic010G236950--Sobic010G180300 Sobic005G019650 Sobic005G019650 Sobic010G236950--Sobic005G019650 Sobic010G236950--Sobic010G165925 Sobic001G115200 Sobic001G115200 Sobic010G236950--Sobic001G115200 Sobic006G185150 Sobic006G185150 Sobic010G236950--Sobic006G185150 Sobic003G025500 Sobic003G025500 Sobic010G236950--Sobic003G025500 Sobic003G033400--Sobic007G152701 Sobic003G033400--Sobic010G263051 Sobic003G033400--Sobic010G236950 Sobic003G033400--Sobic010G180300 Sobic003G033400--Sobic005G019650 Sobic003G033400--Sobic005G107250 Sobic003G033400--Sobic002G142550 Sobic003G033400--Sobic007G048000 Sobic003G033400--Sobic006G185150 Sobic010G263051--Sobic006G185150 Sobic010G263051--Sobic005G019650 Sobic010G263051--Sobic006G024101 Sobic010G263051--Sobic010G180300 Sobic010G263051--Sobic003G294550 Sobic010G263051--Sobic001G115200 Sobic010G263051--Sobic005G107250 Sobic004G300400 Sobic004G300400 Sobic010G263051--Sobic004G300400 Sobic008G135401 Sobic008G135401 Sobic010G263051--Sobic008G135401 Sobic010G116200--Sobic010G180300 Sobic010G116200--Sobic005G019650 Sobic010G116200--Sobic006G024101 Sobic010G116200--Sobic006G185150 Sobic010G116200--Sobic002G142550 Sobic010G116200--Sobic003G294550 Sobic010G116200--Sobic005G107250 Sobic010G116200--Sobic008G135401 Sobic001G310400 Sobic001G310400 Sobic010G116200--Sobic001G310400 Sobic007G048000--Sobic007G152701 Sobic007G048000--Sobic010G263051 SobicK044420 SobicK044420 Sobic007G048000--SobicK044420 Sobic007G048000--Sobic003G033400 Sobic007G048000--Sobic010G236950 Sobic004G233100 Sobic004G233100 Sobic007G048000--Sobic004G233100 Sobic009G220400 Sobic009G220400 Sobic007G048000--Sobic009G220400 Sobic007G048000--Sobic001G115200 Sobic010G227600 Sobic010G227600 Sobic007G048000--Sobic010G227600 Sobic010G123750 Sobic010G123750 Sobic007G069900--Sobic010G123750 Sobic007G069900--Sobic009G220400 Sobic005G071000 Sobic005G071000 Sobic007G069900--Sobic005G071000 Sobic001G056000 Sobic001G056000 Sobic007G069900--Sobic001G056000 Sobic004G236901 Sobic004G236901 Sobic007G069900--Sobic004G236901 Sobic007G069900--SobicK044420 Sobic001G507933 Sobic001G507933 Sobic007G069900--Sobic001G507933 Sobic008G177700 Sobic008G177700 Sobic007G069900--Sobic008G177700 Sobic003G242500 Sobic003G242500 Sobic007G069900--Sobic003G242500 Sobic006G037050--Sobic002G142550 Sobic006G037050--Sobic010G236950 Sobic006G037050--Sobic005G107250 Sobic006G037050--Sobic010G165925 Sobic006G037050--Sobic001G369701 Sobic006G037050--Sobic007G003250 Sobic006G037050--Sobic010G116200 Sobic006G037050--Sobic003G025500 Sobic006G037050--Sobic010G180300
Octagon: transcription factors


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