Gene annotation
Transcriptome id Sobic.004G155000.1
Synonym Sb04g020620
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5XSL5
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65690 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os02g30450.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G019000 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
2 Sobic.007G179700 - -
3 Sobic.002G191400 OsFBX55 - F-box domain containing protein, expressed -
4 Sobic.007G208700 OsWAK90 - OsWAK receptor-like protein kinase, expressed -
5 Sobic.009G223100 IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
6 Sobic.010G257200 - -
7 Sobic.001G352666 - -
8 Sobic.001G469966 - -
9 Sobic.004G207350 - -
10 Sobic.009G152350 - -
11 Sobic.001G423666 - -
12 Sobic.002G336500 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
13 Sobic.006G148600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR18 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.004G068900 cytochrome P450 71D10, putative, expressed -
15 Sobic.001G366401 - -
16 Sobic.008G061900 - -
17 Sobic.003G112500 expressed protein -
18 Sobic.004G230000 expressed protein -
19 Sobic.004G230000 expressed protein -
20 Sobic.004G230000 expressed protein -


Gene co-expression network
sample Sobic004G155000 Sobic004G155000 Sobic004G019000 Sobic004G019000 Sobic004G155000--Sobic004G019000 Sobic007G179700 Sobic007G179700 Sobic004G155000--Sobic007G179700 Sobic002G191400 Sobic002G191400 Sobic004G155000--Sobic002G191400 Sobic007G208700 Sobic007G208700 Sobic004G155000--Sobic007G208700 Sobic009G223100 Sobic009G223100 Sobic004G155000--Sobic009G223100 Sobic010G257200 Sobic010G257200 Sobic004G155000--Sobic010G257200 Sobic001G352666 Sobic001G352666 Sobic004G155000--Sobic001G352666 Sobic001G469966 Sobic001G469966 Sobic004G155000--Sobic001G469966 Sobic004G207350 Sobic004G207350 Sobic004G155000--Sobic004G207350 Sobic001G423666 Sobic001G423666 Sobic004G019000--Sobic001G423666 Sobic004G230000 Sobic004G230000 Sobic004G019000--Sobic004G230000 Sobic007G179700--Sobic002G191400 Sobic007G179700--Sobic004G155000 Sobic007G179700--Sobic001G352666 Sobic007G179700--Sobic004G019000 Sobic007G179700--Sobic001G469966 Sobic007G179700--Sobic009G223100 Sobic007G179700--Sobic007G208700 Sobic009G152350 Sobic009G152350 Sobic007G179700--Sobic009G152350 Sobic007G179700--Sobic004G207350 Sobic002G191400--Sobic001G469966 Sobic002G191400--Sobic007G179700 Sobic002G191400--Sobic004G155000 Sobic002G191400--Sobic009G152350 Sobic008G061900 Sobic008G061900 Sobic002G191400--Sobic008G061900 Sobic007G072700 Sobic007G072700 Sobic002G191400--Sobic007G072700 Sobic002G191400--Sobic004G207350 Sobic003G165401 Sobic003G165401 Sobic002G191400--Sobic003G165401 Sobic008G140500 Sobic008G140500 Sobic002G191400--Sobic008G140500 Sobic007G208700--Sobic010G257200 Sobic003G375400 Sobic003G375400 Sobic007G208700--Sobic003G375400 Sobic007G208700--Sobic004G019000 Sobic002G040550 Sobic002G040550 Sobic007G208700--Sobic002G040550 Sobic009G236900 Sobic009G236900 Sobic007G208700--Sobic009G236900 Sobic006G130100 Sobic006G130100 Sobic007G208700--Sobic006G130100 Sobic003G050100 Sobic003G050100 Sobic007G208700--Sobic003G050100 Sobic006G139200 Sobic006G139200 Sobic007G208700--Sobic006G139200 Sobic003G330350 Sobic003G330350 Sobic007G208700--Sobic003G330350 Sobic002G043201 Sobic002G043201 Sobic009G223100--Sobic002G043201 Sobic006G148600 Sobic006G148600 Sobic009G223100--Sobic006G148600 Sobic003G071800 Sobic003G071800 Sobic009G223100--Sobic003G071800 Sobic002G336500 Sobic002G336500 Sobic009G223100--Sobic002G336500 Sobic010G168100 Sobic010G168100 Sobic009G223100--Sobic010G168100 Sobic002G375000 Sobic002G375000 Sobic009G223100--Sobic002G375000 Sobic009G223100--Sobic002G191400 Sobic009G223100--Sobic009G152350 Sobic001G432750 Sobic001G432750 Sobic009G223100--Sobic001G432750 Sobic010G257200--Sobic007G208700 Sobic002G216300 Sobic002G216300 Sobic010G257200--Sobic002G216300 Sobic010G257200--Sobic003G375400 Sobic009G153366 Sobic009G153366 Sobic010G257200--Sobic009G153366 Sobic010G257200--Sobic006G130100 Sobic010G257200--Sobic002G040550 Sobic010G257200--Sobic004G019000 Sobic009G230600 Sobic009G230600 Sobic010G257200--Sobic009G230600 Sobic009G046300 Sobic009G046300 Sobic010G257200--Sobic009G046300 Sobic001G352666--Sobic007G179700 Sobic004G322500 Sobic004G322500 Sobic001G352666--Sobic004G322500 Sobic001G352666--Sobic004G155000 Sobic001G352666--Sobic002G191400 Sobic001G352666--Sobic004G019000 Sobic001G352666--Sobic007G208700 Sobic006G155300 Sobic006G155300 Sobic001G352666--Sobic006G155300 Sobic001G469300 Sobic001G469300 Sobic001G352666--Sobic001G469300 Sobic007G218900 Sobic007G218900 Sobic001G352666--Sobic007G218900 Sobic001G469966--Sobic002G191400 Sobic001G469966--Sobic007G072700 Sobic007G156400 Sobic007G156400 Sobic001G469966--Sobic007G156400 Sobic001G371650 Sobic001G371650 Sobic001G469966--Sobic001G371650 Sobic004G264800 Sobic004G264800 Sobic001G469966--Sobic004G264800 Sobic001G469966--Sobic004G207350 Sobic004G282200 Sobic004G282200 Sobic001G469966--Sobic004G282200 Sobic007G032200 Sobic007G032200 Sobic001G469966--Sobic007G032200 Sobic004G037401 Sobic004G037401 Sobic001G469966--Sobic004G037401 Sobic004G207350--Sobic004G037401 Sobic003G406120 Sobic003G406120 Sobic004G207350--Sobic003G406120 Sobic009G022600 Sobic009G022600 Sobic004G207350--Sobic009G022600 Sobic005G230900 Sobic005G230900 Sobic004G207350--Sobic005G230900 Sobic006G108766 Sobic006G108766 Sobic004G207350--Sobic006G108766 Sobic001G421450 Sobic001G421450 Sobic004G207350--Sobic001G421450 Sobic007G137201 Sobic007G137201 Sobic004G207350--Sobic007G137201 Sobic003G149700 Sobic003G149700 Sobic004G207350--Sobic003G149700 Sobic001G084133 Sobic001G084133 Sobic004G207350--Sobic001G084133
Octagon: transcription factors


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