Gene annotation
Transcriptome id Sobic.005G060700.4,Sobic.005G060700.1,Sobic.005G060700.3,Sobic.005G060700.2
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5RGV3 , A0A1Z5RGZ3 , A0A1Z5RGW9
Pfam PF07714
Panther DB PTHR27002 PTHR27002:SF153
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K17302; COPB2, coatomer subunit beta'
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G11300 : protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
RAP-DB (Rice) LOC_Os11g11890.1,LOC_Os11g10640.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2D02G024700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G060666 - -
2 Sobic.006G007300 - -
3 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.005G219100 patatin, putative, expressed -
5 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -
6 Sobic.002G087500 - -
7 Sobic.008G028566 - -
8 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
9 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
10 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
11 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
13 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
14 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
15 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
16 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
17 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
18 Sobic.001G291500 - -
19 Sobic.006G007600 polyphenol oxidase, putative, expressed -
20 Sobic.004G143801 - -


Gene co-expression network
sample Sobic005G060700 Sobic005G060700 Sobic005G060666 Sobic005G060666 Sobic005G060700--Sobic005G060666 Sobic006G007300 Sobic006G007300 Sobic005G060700--Sobic006G007300 Sobic008G077800 Sobic008G077800 Sobic005G060700--Sobic008G077800 Sobic005G219100 Sobic005G219100 Sobic005G060700--Sobic005G219100 Sobic005G219000 Sobic005G219000 Sobic005G060700--Sobic005G219000 Sobic002G087500 Sobic002G087500 Sobic005G060700--Sobic002G087500 Sobic008G028566 Sobic008G028566 Sobic005G060700--Sobic008G028566 Sobic008G028600 Sobic008G028600 Sobic005G060700--Sobic008G028600 Sobic006G007100 Sobic006G007100 Sobic005G060700--Sobic006G007100 Sobic005G060666--Sobic005G060700 Sobic005G060666--Sobic008G077800 Sobic005G060666--Sobic002G087500 Sobic002G040400 Sobic002G040400 Sobic005G060666--Sobic002G040400 Sobic005G060666--Sobic006G007300 Sobic005G060666--Sobic008G028600 Sobic002G298400 Sobic002G298400 Sobic005G060666--Sobic002G298400 Sobic005G060666--Sobic008G028566 Sobic005G060666--Sobic005G219000 Sobic006G007300--Sobic008G077800 Sobic006G007300--Sobic008G028566 Sobic002G093600 Sobic002G093600 Sobic006G007300--Sobic002G093600 Sobic002G391700 Sobic002G391700 Sobic006G007300--Sobic002G391700 Sobic008G145200 Sobic008G145200 Sobic006G007300--Sobic008G145200 Sobic006G007300--Sobic008G028600 Sobic006G007300--Sobic005G219000 Sobic006G007300--Sobic002G087500 Sobic006G007300--Sobic002G298400 Sobic008G077800--Sobic006G007300 Sobic008G077800--Sobic002G391700 Sobic008G077800--Sobic008G028566 Sobic008G077800--Sobic002G093600 Sobic008G077800--Sobic008G028600 Sobic008G077800--Sobic002G087500 Sobic008G077800--Sobic005G219000 Sobic008G077800--Sobic002G040400 Sobic008G077800--Sobic002G298400 Sobic005G219100--Sobic005G219000 Sobic001G125700 Sobic001G125700 Sobic005G219100--Sobic001G125700 Sobic005G219100--Sobic006G007100 Sobic006G005500 Sobic006G005500 Sobic005G219100--Sobic006G005500 Sobic006G005400 Sobic006G005400 Sobic005G219100--Sobic006G005400 Sobic005G219100--Sobic008G028600 Sobic005G219100--Sobic008G077800 Sobic005G219100--Sobic002G040400 Sobic005G219100--Sobic008G028566 Sobic005G219000--Sobic005G219100 Sobic005G219000--Sobic001G125700 Sobic005G219000--Sobic006G005500 Sobic005G219000--Sobic008G028600 Sobic005G219000--Sobic002G040400 Sobic005G219000--Sobic008G077800 Sobic005G219000--Sobic006G007100 Sobic005G219000--Sobic006G005400 Sobic005G219000--Sobic002G087500 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700 Sobic008G028566--Sobic006G007300 Sobic008G028566--Sobic008G077800 Sobic008G028566--Sobic002G093600 Sobic008G028566--Sobic002G391700 Sobic008G028566--Sobic008G028600 Sobic008G028566--Sobic005G219000 Sobic008G028566--Sobic002G298400 Sobic008G028566--Sobic002G087500 Sobic008G028566--Sobic002G040400 Sobic008G028600--Sobic002G040400 Sobic008G028600--Sobic005G219000 Sobic008G028600--Sobic002G087500 Sobic008G028600--Sobic006G005500 Sobic008G028600--Sobic001G125700 Sobic008G028600--Sobic002G391700 Sobic008G028600--Sobic002G298400 Sobic008G028600--Sobic008G077800 Sobic008G028600--Sobic005G219100 Sobic006G007100--Sobic006G005400 Sobic006G007100--Sobic005G219100 Sobic006G007600 Sobic006G007600 Sobic006G007100--Sobic006G007600 Sobic006G007100--Sobic005G219000 Sobic006G007100--Sobic001G125700 Sobic006G007100--Sobic006G005500 Sobic001G291500 Sobic001G291500 Sobic006G007100--Sobic001G291500 Sobic006G007100--Sobic008G028600 Sobic006G007100--Sobic008G077800
Octagon: transcription factors


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