Gene annotation
Transcriptome id Sobic.005G073101.1
Synonym -
Functional annotation -
UniProt A0A1Z5RH42
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF90
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G22660 : FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os11g09474.1 : OsFBX400 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G138966 - -
2 Sobic.001G450100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
3 Sobic.004G067850 - -
4 Sobic.008G032850 - -
5 Sobic.002G089300 LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
6 Sobic.001G084200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -
8 Sobic.001G192750 - -
9 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
10 Sobic.008G192100 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.003G389500 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
12 Sobic.002G243100 expressed protein -
13 Sobic.001G493300 glycerol-3-phosphate acyltransferase, putative, expressed -
14 Sobic.002G302400 SAM dependent carboxyl methyltransferase, putative, expressed -
15 Sobic.003G063600 expressed protein -
16 Sobic.004G196900 - -
17 Sobic.009G168700 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
18 Sobic.008G192200 - -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G073101 Sobic005G073101 Sobic006G138966 Sobic006G138966 Sobic005G073101--Sobic006G138966 Sobic001G450100 Sobic001G450100 Sobic005G073101--Sobic001G450100 Sobic004G067850 Sobic004G067850 Sobic005G073101--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic005G073101--Sobic008G032850 Sobic002G089300 Sobic002G089300 Sobic005G073101--Sobic002G089300 Sobic001G084200 Sobic001G084200 Sobic005G073101--Sobic001G084200 Sobic001G379800 Sobic001G379800 Sobic005G073101--Sobic001G379800 Sobic001G192750 Sobic001G192750 Sobic005G073101--Sobic001G192750 Sobic004G196000 Sobic004G196000 Sobic005G073101--Sobic004G196000 Sobic006G138966--Sobic005G073101 Sobic006G138966--Sobic001G084200 Sobic006G138966--Sobic004G067850 Sobic006G138966--Sobic008G032850 Sobic006G138966--Sobic001G192750 Sobic009G168700 Sobic009G168700 Sobic006G138966--Sobic009G168700 Sobic009G066850 Sobic009G066850 Sobic006G138966--Sobic009G066850 Sobic006G138966--Sobic001G450100 Sobic002G302400 Sobic002G302400 Sobic006G138966--Sobic002G302400 Sobic003G063600 Sobic003G063600 Sobic001G450100--Sobic003G063600 Sobic001G450100--Sobic001G379800 Sobic001G450100--Sobic004G196000 Sobic001G450100--Sobic008G032850 Sobic001G450100--Sobic004G067850 Sobic008G192100 Sobic008G192100 Sobic001G450100--Sobic008G192100 Sobic001G493300 Sobic001G493300 Sobic001G450100--Sobic001G493300 Sobic003G058400 Sobic003G058400 Sobic001G450100--Sobic003G058400 Sobic001G450100--Sobic002G302400 Sobic004G067850--Sobic008G032850 Sobic004G067850--Sobic002G302400 Sobic001G272300 Sobic001G272300 Sobic004G067850--Sobic001G272300 Sobic008G032850--Sobic004G067850 Sobic008G032850--Sobic002G302400 Sobic008G032850--Sobic001G272300 Sobic004G196900 Sobic004G196900 Sobic002G089300--Sobic004G196900 Sobic006G229400 Sobic006G229400 Sobic002G089300--Sobic006G229400 Sobic002G089300--Sobic001G379800 Sobic002G089300--Sobic004G196000 Sobic002G089300--Sobic001G450100 Sobic003G389500 Sobic003G389500 Sobic002G089300--Sobic003G389500 Sobic002G089300--Sobic003G063600 Sobic005G029300 Sobic005G029300 Sobic002G089300--Sobic005G029300 Sobic006G236100 Sobic006G236100 Sobic002G089300--Sobic006G236100 Sobic001G084200--Sobic009G168700 Sobic001G084200--Sobic004G067850 Sobic001G084200--Sobic008G032850 Sobic006G178200 Sobic006G178200 Sobic001G084200--Sobic006G178200 Sobic001G084200--Sobic002G302400 Sobic001G084200--Sobic008G192100 Sobic005G082950 Sobic005G082950 Sobic001G084200--Sobic005G082950 Sobic004G048600 Sobic004G048600 Sobic001G084200--Sobic004G048600 Sobic001G084200--Sobic001G272300 Sobic001G379800--Sobic004G196000 Sobic001G379800--Sobic001G493300 Sobic001G379800--Sobic008G192100 Sobic008G192200 Sobic008G192200 Sobic001G379800--Sobic008G192200 Sobic001G379800--Sobic001G272300 Sobic001G192750--Sobic009G066850 Sobic001G192750--Sobic004G067850 Sobic001G192750--Sobic008G032850 Sobic001G192750--Sobic001G084200 Sobic001G192750--Sobic009G168700 Sobic001G192750--Sobic006G138966 Sobic001G192750--Sobic002G302400 Sobic001G192750--Sobic008G192100 Sobic001G192750--Sobic001G272300 Sobic004G196000--Sobic008G192100 Sobic004G196000--Sobic001G493300 Sobic004G196000--Sobic008G192200 Sobic004G196000--Sobic001G272300
Octagon: transcription factors


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