Gene annotation
Transcriptome id Sobic.005G074200.1
Synonym Sb05g006140
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5RIA4
Pfam -
Panther DB PTHR31509 PTHR31509:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g09180.2 : expressed protein
MaizeGDB (Corn) Zm00025a029600
Brachypodium PNT63980 , PNT63981
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G141333 - -
2 Sobic.007G132300 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.007G014500 NB-ARC domain containing protein, expressed -
4 Sobic.001G419200 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
5 Sobic.010G127901 - -
6 Sobic.006G159500 serpin domain containing protein, putative, expressed K13963: serpin B
7 Sobic.004G176550 - -
8 Sobic.001G170600 OsFBX85 - F-box domain containing protein, expressed -
9 Sobic.001G320800 - -
10 Sobic.005G165300 cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
11 Sobic.003G261766 - -
12 Sobic.009G115800 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
13 Sobic.004G288300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@allantoin permease, putative, expressed K03457: nucleobase:cation symporter-1, NCS1 family
14 Sobic.005G216833 - -
15 Sobic.009G236150 - -
16 Sobic.009G091940 - -
17 Sobic.004G091800 - -
18 Sobic.009G251700 DNA ligase, putative, expressed -
19 Sobic.010G003800 expressed protein -
20 Sobic.007G151250 - -


Gene co-expression network
sample Sobic005G074200 Sobic005G074200 Sobic001G141333 Sobic001G141333 Sobic005G074200--Sobic001G141333 Sobic007G132300 Sobic007G132300 Sobic005G074200--Sobic007G132300 Sobic007G014500 Sobic007G014500 Sobic005G074200--Sobic007G014500 Sobic001G419200 Sobic001G419200 Sobic005G074200--Sobic001G419200 Sobic010G127901 Sobic010G127901 Sobic005G074200--Sobic010G127901 Sobic006G159500 Sobic006G159500 Sobic005G074200--Sobic006G159500 Sobic004G176550 Sobic004G176550 Sobic005G074200--Sobic004G176550 Sobic001G170600 Sobic001G170600 Sobic005G074200--Sobic001G170600 Sobic001G320800 Sobic001G320800 Sobic005G074200--Sobic001G320800 Sobic001G141333--Sobic007G014500 Sobic002G160500 Sobic002G160500 Sobic001G141333--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic001G141333--Sobic004G262550 Sobic003G267150 Sobic003G267150 Sobic001G141333--Sobic003G267150 Sobic003G389150 Sobic003G389150 Sobic001G141333--Sobic003G389150 Sobic001G334800 Sobic001G334800 Sobic007G132300--Sobic001G334800 Sobic010G003800 Sobic010G003800 Sobic007G132300--Sobic010G003800 Sobic005G165300 Sobic005G165300 Sobic007G132300--Sobic005G165300 Sobic002G018800 Sobic002G018800 Sobic007G132300--Sobic002G018800 Sobic001G112550 Sobic001G112550 Sobic007G132300--Sobic001G112550 Sobic005G216833 Sobic005G216833 Sobic007G132300--Sobic005G216833 Sobic005G161750 Sobic005G161750 Sobic007G132300--Sobic005G161750 Sobic007G050750 Sobic007G050750 Sobic007G132300--Sobic007G050750 Sobic006G250350 Sobic006G250350 Sobic007G132300--Sobic006G250350 Sobic002G319900 Sobic002G319900 Sobic007G014500--Sobic002G319900 Sobic007G014500--Sobic004G262550 Sobic007G014500--Sobic003G267150 Sobic007G014500--Sobic002G160500 Sobic004G313000 Sobic004G313000 Sobic007G014500--Sobic004G313000 Sobic002G099932 Sobic002G099932 Sobic001G419200--Sobic002G099932 Sobic005G004900 Sobic005G004900 Sobic001G419200--Sobic005G004900 Sobic007G217350 Sobic007G217350 Sobic001G419200--Sobic007G217350 Sobic001G419200--Sobic010G003800 Sobic001G326500 Sobic001G326500 Sobic001G419200--Sobic001G326500 Sobic003G068100 Sobic003G068100 Sobic001G419200--Sobic003G068100 Sobic005G108500 Sobic005G108500 Sobic001G419200--Sobic005G108500 Sobic001G182100 Sobic001G182100 Sobic001G419200--Sobic001G182100 Sobic006G083050 Sobic006G083050 Sobic001G419200--Sobic006G083050 Sobic010G127901--Sobic006G083050 Sobic003G270650 Sobic003G270650 Sobic010G127901--Sobic003G270650 Sobic001G065150 Sobic001G065150 Sobic010G127901--Sobic001G065150 Sobic005G116800 Sobic005G116800 Sobic010G127901--Sobic005G116800 Sobic007G151250 Sobic007G151250 Sobic010G127901--Sobic007G151250 Sobic009G025750 Sobic009G025750 Sobic010G127901--Sobic009G025750 Sobic010G229025 Sobic010G229025 Sobic010G127901--Sobic010G229025 Sobic009G045400 Sobic009G045400 Sobic010G127901--Sobic009G045400 Sobic010G127901--Sobic005G165300 Sobic009G115800 Sobic009G115800 Sobic006G159500--Sobic009G115800 Sobic003G261766 Sobic003G261766 Sobic006G159500--Sobic003G261766 Sobic006G159500--Sobic004G313000 Sobic006G159500--Sobic003G267150 Sobic006G159500--Sobic005G216833 Sobic006G159500--Sobic002G319900 Sobic006G159500--Sobic002G160500 Sobic005G119400 Sobic005G119400 Sobic004G176550--Sobic005G119400 Sobic004G176550--Sobic003G261766 Sobic006G009200 Sobic006G009200 Sobic004G176550--Sobic006G009200 Sobic004G176550--Sobic009G115800 Sobic007G045750 Sobic007G045750 Sobic004G176550--Sobic007G045750 Sobic002G062400 Sobic002G062400 Sobic004G176550--Sobic002G062400 Sobic010G124100 Sobic010G124100 Sobic004G176550--Sobic010G124100 Sobic004G176550--Sobic009G025750 Sobic004G176550--Sobic006G083050 Sobic009G091940 Sobic009G091940 Sobic001G170600--Sobic009G091940 Sobic001G170600--Sobic002G160500 Sobic001G170600--Sobic003G267150 Sobic001G170600--Sobic004G262550 Sobic001G170600--Sobic003G389150 Sobic001G320800--Sobic007G151250 Sobic009G236150 Sobic009G236150 Sobic001G320800--Sobic009G236150 Sobic001G320800--Sobic005G216833 Sobic001G320800--Sobic005G161750 Sobic001G320800--Sobic001G334800 Sobic001G320800--Sobic010G003800 Sobic001G146700 Sobic001G146700 Sobic001G320800--Sobic001G146700 Sobic001G320800--Sobic005G165300 Sobic006G135550 Sobic006G135550 Sobic001G320800--Sobic006G135550
Octagon: transcription factors


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