Gene annotation
Transcriptome id Sobic.005G092600.1,Sobic.005G092600.2
Synonym RPM1, St2B;St2B, R gene homologue, RPS3, Sb05g008030
Functional annotation Up-regulated in Setosphaeria turcica resistant genotype GA06/18 by S. turcica inoculation (PubMedID : 22050783)
- (PubMedID : 25928459)
disease resistance protein RPM1, putative, expressed
UniProt C5Y8B2
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF624
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g12330.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ88881 , PNT60669 , KQJ81789
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G092600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G094001 - -
2 Sobic.003G147900 expressed protein -
3 Sobic.002G235400 - -
4 Sobic.004G087200 flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed -
5 Sobic.006G182401 - -
6 Sobic.002G284600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR39 - Auxin-responsive SAUR gene family member, expressed -
7 Sobic.009G237350 - -
8 Sobic.008G183150 - -
9 Sobic.010G091366 - -
10 Sobic.002G323500 lipase class 3 family protein, putative, expressed -
11 Sobic.005G181200 protein kinase, putative, expressed -
12 Sobic.008G178300 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.003G440100 EF hand family protein, expressed -
14 Sobic.004G131350 - -
15 Sobic.001G509000 cell division control protein 48 homolog E, putative, expressed -
16 Sobic.002G163950 - -
17 Sobic.003G156600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsMADS93 - MADS-box family gene with M-beta type-box, expressed -
18 Sobic.003G346800 hypothetical protein -
19 Sobic.010G222600 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.001G205600 expressed protein -


Gene co-expression network
sample Sobic005G092600 Sobic005G092600 Sobic005G094001 Sobic005G094001 Sobic005G092600--Sobic005G094001 Sobic003G147900 Sobic003G147900 Sobic005G092600--Sobic003G147900 Sobic002G235400 Sobic002G235400 Sobic005G092600--Sobic002G235400 Sobic004G087200 Sobic004G087200 Sobic005G092600--Sobic004G087200 Sobic006G182401 Sobic006G182401 Sobic005G092600--Sobic006G182401 Sobic002G284600 Sobic002G284600 Sobic005G092600--Sobic002G284600 Sobic009G237350 Sobic009G237350 Sobic005G092600--Sobic009G237350 Sobic008G183150 Sobic008G183150 Sobic005G092600--Sobic008G183150 Sobic010G091366 Sobic010G091366 Sobic005G092600--Sobic010G091366 Sobic010G204000 Sobic010G204000 Sobic005G094001--Sobic010G204000 Sobic008G178300 Sobic008G178300 Sobic005G094001--Sobic008G178300 Sobic001G044200 Sobic001G044200 Sobic005G094001--Sobic001G044200 Sobic010G094750 Sobic010G094750 Sobic005G094001--Sobic010G094750 Sobic010G123000 Sobic010G123000 Sobic005G094001--Sobic010G123000 Sobic002G313850 Sobic002G313850 Sobic005G094001--Sobic002G313850 Sobic003G318350 Sobic003G318350 Sobic005G094001--Sobic003G318350 Sobic001G205600 Sobic001G205600 Sobic005G094001--Sobic001G205600 Sobic003G125200 Sobic003G125200 Sobic005G094001--Sobic003G125200 Sobic010G103000 Sobic010G103000 Sobic003G147900--Sobic010G103000 Sobic003G188900 Sobic003G188900 Sobic003G147900--Sobic003G188900 Sobic004G078400 Sobic004G078400 Sobic003G147900--Sobic004G078400 Sobic001G502300 Sobic001G502300 Sobic003G147900--Sobic001G502300 Sobic001G528000 Sobic001G528000 Sobic003G147900--Sobic001G528000 Sobic001G509000 Sobic001G509000 Sobic003G147900--Sobic001G509000 Sobic001G267400 Sobic001G267400 Sobic003G147900--Sobic001G267400 Sobic001G267950 Sobic001G267950 Sobic003G147900--Sobic001G267950 Sobic004G131350 Sobic004G131350 Sobic003G147900--Sobic004G131350 Sobic002G235400--Sobic008G183150 Sobic002G235400--Sobic001G509000 Sobic005G143800 Sobic005G143800 Sobic002G235400--Sobic005G143800 Sobic005G050700 Sobic005G050700 Sobic002G235400--Sobic005G050700 Sobic005G000400 Sobic005G000400 Sobic002G235400--Sobic005G000400 Sobic005G149650 Sobic005G149650 Sobic002G235400--Sobic005G149650 Sobic003G440100 Sobic003G440100 Sobic002G235400--Sobic003G440100 Sobic009G156700 Sobic009G156700 Sobic002G235400--Sobic009G156700 Sobic009G197350 Sobic009G197350 Sobic002G235400--Sobic009G197350 Sobic004G087200--Sobic002G284600 Sobic009G022500 Sobic009G022500 Sobic004G087200--Sobic009G022500 Sobic004G087200--Sobic009G237350 Sobic002G054901 Sobic002G054901 Sobic004G087200--Sobic002G054901 Sobic003G316400 Sobic003G316400 Sobic004G087200--Sobic003G316400 Sobic008G100950 Sobic008G100950 Sobic004G087200--Sobic008G100950 Sobic003G311250 Sobic003G311250 Sobic004G087200--Sobic003G311250 Sobic009G011800 Sobic009G011800 Sobic004G087200--Sobic009G011800 Sobic004G087200--Sobic010G091366 Sobic006G182401--Sobic010G123000 Sobic003G156600 Sobic003G156600 Sobic006G182401--Sobic003G156600 Sobic010G064050 Sobic010G064050 Sobic006G182401--Sobic010G064050 Sobic001G100650 Sobic001G100650 Sobic006G182401--Sobic001G100650 Sobic005G080075 Sobic005G080075 Sobic006G182401--Sobic005G080075 Sobic002G082350 Sobic002G082350 Sobic006G182401--Sobic002G082350 Sobic006G182401--Sobic002G313850 Sobic003G008400 Sobic003G008400 Sobic006G182401--Sobic003G008400 Sobic009G073200 Sobic009G073200 Sobic006G182401--Sobic009G073200 Sobic002G284600--Sobic009G237350 Sobic002G284600--Sobic008G178300 Sobic008G178200 Sobic008G178200 Sobic002G284600--Sobic008G178200 Sobic003G395600 Sobic003G395600 Sobic002G284600--Sobic003G395600 Sobic002G284600--Sobic002G054901 Sobic003G009501 Sobic003G009501 Sobic002G284600--Sobic003G009501 Sobic002G284600--Sobic004G087200 Sobic002G284600--Sobic003G311250 Sobic010G222600 Sobic010G222600 Sobic002G284600--Sobic010G222600 Sobic009G237350--Sobic008G178200 Sobic009G237350--Sobic008G178300 Sobic009G237350--Sobic002G284600 Sobic009G237350--Sobic008G100950 Sobic009G237350--Sobic010G091366 Sobic008G153900 Sobic008G153900 Sobic009G237350--Sobic008G153900 Sobic004G338400 Sobic004G338400 Sobic009G237350--Sobic004G338400 Sobic009G237350--Sobic002G054901 Sobic009G237350--Sobic003G316400 Sobic008G183150--Sobic003G156600 Sobic003G318600 Sobic003G318600 Sobic008G183150--Sobic003G318600 Sobic001G101650 Sobic001G101650 Sobic008G183150--Sobic001G101650 Sobic008G183150--Sobic003G008400 Sobic008G183150--Sobic006G182401 Sobic003G254400 Sobic003G254400 Sobic008G183150--Sobic003G254400 Sobic010G263151 Sobic010G263151 Sobic008G183150--Sobic010G263151 Sobic008G183150--Sobic005G080075 Sobic008G183150--Sobic010G123000 Sobic005G181700 Sobic005G181700 Sobic010G091366--Sobic005G181700 Sobic002G069601 Sobic002G069601 Sobic010G091366--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic010G091366--Sobic003G318400 Sobic007G059800 Sobic007G059800 Sobic010G091366--Sobic007G059800 Sobic003G034250 Sobic003G034250 Sobic010G091366--Sobic003G034250 Sobic006G053500 Sobic006G053500 Sobic010G091366--Sobic006G053500 Sobic004G082200 Sobic004G082200 Sobic010G091366--Sobic004G082200 Sobic009G150100 Sobic009G150100 Sobic010G091366--Sobic009G150100 Sobic004G201200 Sobic004G201200 Sobic010G091366--Sobic004G201200
Octagon: transcription factors


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