Gene annotation
Transcriptome id Sobic.010G222600.1,Sobic.010G222600.2
Synonym BPM1, ATBPM1, Sb10g026790
Functional annotation MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A194YKR4 , C5Z7P5
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF178
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os06g14060.2,LOC_Os06g14060.1 : MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G045800 cytochrome P450, putative, expressed -
2 Sobic.009G237350 - -
3 Sobic.002G284600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR39 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.003G440100 EF hand family protein, expressed -
5 Sobic.005G000400 RNase P subunit p30, putative, expressed -
6 Sobic.004G230200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
7 Sobic.010G043350 - -
8 Sobic.010G135450 - -
9 Sobic.002G264100 transcription factor RF2a, putative, expressed -
10 Sobic.002G342901 - -
11 Sobic.006G167250 - -
12 Sobic.005G130500 terpene synthase, putative, expressed -
13 Sobic.003G188700 expressed protein -
14 Sobic.010G131101 - -
15 Sobic.001G205600 expressed protein -
16 Sobic.007G176300 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
17 Sobic.009G247601 - -
18 Sobic.008G083600 nodulation protein-related, putative, expressed -
19 Sobic.002G002800 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.008G178300 NBS-LRR disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic010G222600 Sobic010G222600 Sobic006G045800 Sobic006G045800 Sobic010G222600--Sobic006G045800 Sobic009G237350 Sobic009G237350 Sobic010G222600--Sobic009G237350 Sobic002G284600 Sobic002G284600 Sobic010G222600--Sobic002G284600 Sobic003G440100 Sobic003G440100 Sobic010G222600--Sobic003G440100 Sobic005G000400 Sobic005G000400 Sobic010G222600--Sobic005G000400 Sobic004G230200 Sobic004G230200 Sobic010G222600--Sobic004G230200 Sobic010G043350 Sobic010G043350 Sobic010G222600--Sobic010G043350 Sobic010G135450 Sobic010G135450 Sobic010G222600--Sobic010G135450 Sobic002G264100 Sobic002G264100 Sobic010G222600--Sobic002G264100 Sobic007G003250 Sobic007G003250 Sobic006G045800--Sobic007G003250 Sobic003G188700 Sobic003G188700 Sobic006G045800--Sobic003G188700 Sobic010G165925 Sobic010G165925 Sobic006G045800--Sobic010G165925 Sobic005G107250 Sobic005G107250 Sobic006G045800--Sobic005G107250 Sobic001G369701 Sobic001G369701 Sobic006G045800--Sobic001G369701 Sobic002G142550 Sobic002G142550 Sobic006G045800--Sobic002G142550 Sobic003G193400 Sobic003G193400 Sobic006G045800--Sobic003G193400 Sobic010G180300 Sobic010G180300 Sobic006G045800--Sobic010G180300 Sobic006G196800 Sobic006G196800 Sobic006G045800--Sobic006G196800 Sobic008G178200 Sobic008G178200 Sobic009G237350--Sobic008G178200 Sobic008G178300 Sobic008G178300 Sobic009G237350--Sobic008G178300 Sobic009G237350--Sobic002G284600 Sobic008G100950 Sobic008G100950 Sobic009G237350--Sobic008G100950 Sobic010G091366 Sobic010G091366 Sobic009G237350--Sobic010G091366 Sobic008G153900 Sobic008G153900 Sobic009G237350--Sobic008G153900 Sobic004G338400 Sobic004G338400 Sobic009G237350--Sobic004G338400 Sobic002G054901 Sobic002G054901 Sobic009G237350--Sobic002G054901 Sobic003G316400 Sobic003G316400 Sobic009G237350--Sobic003G316400 Sobic002G284600--Sobic009G237350 Sobic002G284600--Sobic008G178300 Sobic002G284600--Sobic008G178200 Sobic003G395600 Sobic003G395600 Sobic002G284600--Sobic003G395600 Sobic002G284600--Sobic002G054901 Sobic003G009501 Sobic003G009501 Sobic002G284600--Sobic003G009501 Sobic004G087200 Sobic004G087200 Sobic002G284600--Sobic004G087200 Sobic003G311250 Sobic003G311250 Sobic002G284600--Sobic003G311250 Sobic002G284600--Sobic010G222600 Sobic007G145300 Sobic007G145300 Sobic003G440100--Sobic007G145300 Sobic009G197350 Sobic009G197350 Sobic003G440100--Sobic009G197350 Sobic009G156700 Sobic009G156700 Sobic003G440100--Sobic009G156700 Sobic003G242300 Sobic003G242300 Sobic003G440100--Sobic003G242300 Sobic002G124766 Sobic002G124766 Sobic003G440100--Sobic002G124766 Sobic002G082350 Sobic002G082350 Sobic003G440100--Sobic002G082350 Sobic002G269800 Sobic002G269800 Sobic003G440100--Sobic002G269800 Sobic010G064050 Sobic010G064050 Sobic003G440100--Sobic010G064050 Sobic001G100650 Sobic001G100650 Sobic003G440100--Sobic001G100650 Sobic005G143800 Sobic005G143800 Sobic005G000400--Sobic005G143800 Sobic003G267400 Sobic003G267400 Sobic005G000400--Sobic003G267400 Sobic005G000400--Sobic010G135450 Sobic010G263151 Sobic010G263151 Sobic005G000400--Sobic010G263151 Sobic005G000400--Sobic007G003250 Sobic005G000400--Sobic006G196800 Sobic001G209000 Sobic001G209000 Sobic005G000400--Sobic001G209000 Sobic003G419100 Sobic003G419100 Sobic005G000400--Sobic003G419100 Sobic001G355850 Sobic001G355850 Sobic005G000400--Sobic001G355850 Sobic006G094201 Sobic006G094201 Sobic004G230200--Sobic006G094201 Sobic006G118200 Sobic006G118200 Sobic004G230200--Sobic006G118200 Sobic004G230200--Sobic006G045800 Sobic007G203600 Sobic007G203600 Sobic004G230200--Sobic007G203600 Sobic001G221700 Sobic001G221700 Sobic004G230200--Sobic001G221700 Sobic004G230200--Sobic010G222600 Sobic004G230200--Sobic003G440100 Sobic001G195866 Sobic001G195866 Sobic004G230200--Sobic001G195866 Sobic003G348300 Sobic003G348300 Sobic004G230200--Sobic003G348300 Sobic003G360500 Sobic003G360500 Sobic010G043350--Sobic003G360500 Sobic003G254400 Sobic003G254400 Sobic010G043350--Sobic003G254400 Sobic005G057500 Sobic005G057500 Sobic010G043350--Sobic005G057500 Sobic003G008400 Sobic003G008400 Sobic010G043350--Sobic003G008400 Sobic008G191800 Sobic008G191800 Sobic010G043350--Sobic008G191800 Sobic005G080075 Sobic005G080075 Sobic010G043350--Sobic005G080075 Sobic010G043350--Sobic001G100650 Sobic010G043350--Sobic010G064050 Sobic010G043350--Sobic003G188700 Sobic010G135450--Sobic005G143800 Sobic001G101650 Sobic001G101650 Sobic010G135450--Sobic001G101650 Sobic010G135450--Sobic003G254400 Sobic010G135450--Sobic003G008400 Sobic010G135450--Sobic005G080075 Sobic010G135450--Sobic001G100650 Sobic010G135450--Sobic010G064050 Sobic002G313850 Sobic002G313850 Sobic010G135450--Sobic002G313850 Sobic010G135450--Sobic002G082350 Sobic001G205600 Sobic001G205600 Sobic002G264100--Sobic001G205600 Sobic002G264100--Sobic003G440100 Sobic009G247601 Sobic009G247601 Sobic002G264100--Sobic009G247601 Sobic002G264100--Sobic010G091366 Sobic003G318350 Sobic003G318350 Sobic002G264100--Sobic003G318350 Sobic007G003300 Sobic007G003300 Sobic002G264100--Sobic007G003300 Sobic002G292400 Sobic002G292400 Sobic002G264100--Sobic002G292400 Sobic006G223700 Sobic006G223700 Sobic002G264100--Sobic006G223700 Sobic003G146450 Sobic003G146450 Sobic002G264100--Sobic003G146450
Octagon: transcription factors


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