Gene annotation
Transcriptome id Sobic.005G219900.1
Synonym Sb05g027040, RPM1, RPS3
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5Y8D0
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF576
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g46210.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055560
Brachypodium KQK12047
Barley HORVU2Hr1G006480.4 , HORVU2Hr1G006480.5 , HORVU2Hr1G006480.2 , HORVU2Hr1G006480.1 , HORVU3Hr1G002150.1 , HORVU3Hr1G002150.3 , HORVU3Hr1G002150.2 , HORVU3Hr1G002150.5 , HORVU3Hr1G002150.4 , HORVU3Hr1G002150.7 , HORVU3Hr1G002150.6 , HORVU3Hr1G002150.9 , HORVU3Hr1G002150.8 , HORVU2Hr1G006480.6 , HORVU2Hr1G006480.7 , HORVU2Hr1G006480.3 , HORVU2Hr1G006480.8 , HORVU2Hr1G006480.9 , HORVU3Hr1G002150.11 , HORVU3Hr1G002150.10 , HORVU3Hr1G002150.12
Wheat TraesCS1B02G420400 , TraesCS1B02G420400 , TraesCS1B02G420400 , TraesCS4A02G487300 , TraesCS4A02G487300 , TraesCS7D02G007000 , TraesCS4A02G487500 , TraesCS5B02G540300 , TraesCS2B02G020200 , TraesCS7A02G006200 , TraesCS4A02G490900 , TraesCS4A02G493300 , TraesCSU02G042600 , TraesCS2B02G054900 , TraesCS1D02G051400 , TraesCS2D02G042200 , TraesCS5B02G473500 , TraesCS5B02G473500 , TraesCS4B02G372900 , TraesCS3A02G014600 , TraesCS5D02G548500 , TraesCS7D02G006700 , TraesCS7A02G007900 , TraesCS4A02G488400 , TraesCS3D02G012600 , TraesCS3D02G012600 , TraesCS4A02G490800 , TraesCS4A02G494100 , TraesCSU02G154500 , TraesCS2A02G042400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G437600 - -
2 Sobic.005G040950 - -
3 Sobic.003G339400 RING-H2 finger protein ATL5G, putative, expressed -
4 Sobic.005G219800 - -
5 Sobic.008G147800 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.003G289300 3-5 exonuclease domain-containing protein, putative, expressed -
7 Sobic.009G258200 - -
8 Sobic.010G010100 powdery mildew resistance protein PM3b, putative, expressed -
9 Sobic.005G205000 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
10 Sobic.005G106900 expressed protein K17757: ATP-dependent NAD(P)H-hydrate dehydratase
11 Sobic.007G131300 endoglucanase, putative, expressed -
12 Sobic.005G059300 ctr copper transporter family protein, putative, expressed -
13 Sobic.010G051600 - -
14 Sobic.009G142600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich receptor-like protein kinase 6 precursor, putative, expressed -
15 Sobic.008G045900 - -
16 Sobic.010G065500 BHLH transcription factor, putative, expressed -
17 Sobic.008G055650 - -
18 Sobic.010G051900 expressed protein -
19 Sobic.009G133100 cytochrome P450 72A1, putative, expressed -
20 Sobic.002G076200 - -


Gene co-expression network
sample Sobic005G219900 Sobic005G219900 Sobic001G437600 Sobic001G437600 Sobic005G219900--Sobic001G437600 Sobic005G040950 Sobic005G040950 Sobic005G219900--Sobic005G040950 Sobic003G339400 Sobic003G339400 Sobic005G219900--Sobic003G339400 Sobic005G219800 Sobic005G219800 Sobic005G219900--Sobic005G219800 Sobic008G147800 Sobic008G147800 Sobic005G219900--Sobic008G147800 Sobic003G289300 Sobic003G289300 Sobic005G219900--Sobic003G289300 Sobic009G258200 Sobic009G258200 Sobic005G219900--Sobic009G258200 Sobic010G010100 Sobic010G010100 Sobic005G219900--Sobic010G010100 Sobic005G205000 Sobic005G205000 Sobic005G219900--Sobic005G205000 Sobic001G437600--Sobic010G010100 Sobic005G059300 Sobic005G059300 Sobic001G437600--Sobic005G059300 Sobic001G437600--Sobic003G339400 Sobic009G142600 Sobic009G142600 Sobic001G437600--Sobic009G142600 Sobic001G437600--Sobic005G219800 Sobic004G173900 Sobic004G173900 Sobic001G437600--Sobic004G173900 Sobic008G045900 Sobic008G045900 Sobic001G437600--Sobic008G045900 Sobic008G139200 Sobic008G139200 Sobic001G437600--Sobic008G139200 Sobic010G091750 Sobic010G091750 Sobic001G437600--Sobic010G091750 Sobic005G040950--Sobic003G289300 Sobic005G040950--Sobic003G339400 Sobic010G051900 Sobic010G051900 Sobic005G040950--Sobic010G051900 Sobic005G040950--Sobic001G437600 Sobic001G241500 Sobic001G241500 Sobic005G040950--Sobic001G241500 Sobic007G119400 Sobic007G119400 Sobic005G040950--Sobic007G119400 Sobic002G076200 Sobic002G076200 Sobic005G040950--Sobic002G076200 Sobic005G040950--Sobic005G219800 Sobic001G494350 Sobic001G494350 Sobic005G040950--Sobic001G494350 Sobic003G339400--Sobic005G219800 Sobic003G339400--Sobic009G258200 Sobic003G339400--Sobic005G205000 Sobic003G339400--Sobic003G289300 Sobic003G339400--Sobic007G119400 Sobic003G339400--Sobic008G045900 Sobic003G339400--Sobic009G142600 Sobic007G090418 Sobic007G090418 Sobic003G339400--Sobic007G090418 Sobic003G339400--Sobic005G040950 Sobic005G219800--Sobic008G045900 Sobic005G219800--Sobic009G258200 Sobic005G219800--Sobic005G205000 Sobic005G219800--Sobic003G339400 Sobic001G138500 Sobic001G138500 Sobic005G219800--Sobic001G138500 Sobic005G219800--Sobic009G142600 Sobic003G120050 Sobic003G120050 Sobic005G219800--Sobic003G120050 Sobic005G207550 Sobic005G207550 Sobic005G219800--Sobic005G207550 Sobic008G008701 Sobic008G008701 Sobic005G219800--Sobic008G008701 Sobic008G147800--Sobic009G258200 Sobic010G065500 Sobic010G065500 Sobic008G147800--Sobic010G065500 Sobic008G147800--Sobic005G205000 Sobic003G083100 Sobic003G083100 Sobic008G147800--Sobic003G083100 Sobic008G147800--Sobic005G219800 Sobic008G147800--Sobic008G045900 Sobic007G131300 Sobic007G131300 Sobic008G147800--Sobic007G131300 Sobic008G045100 Sobic008G045100 Sobic008G147800--Sobic008G045100 Sobic008G147800--Sobic009G142600 Sobic003G289300--Sobic005G040950 Sobic003G289300--Sobic003G339400 Sobic003G289300--Sobic007G119400 Sobic003G289300--Sobic001G437600 Sobic003G289300--Sobic005G219800 Sobic003G289300--Sobic001G241500 Sobic003G289300--Sobic002G076200 Sobic003G289300--Sobic009G258200 Sobic003G289300--Sobic010G051900 Sobic009G258200--Sobic008G045900 Sobic009G258200--Sobic009G142600 Sobic009G258200--Sobic005G205000 Sobic009G258200--Sobic003G083100 Sobic005G120433 Sobic005G120433 Sobic009G258200--Sobic005G120433 Sobic009G258200--Sobic008G045100 Sobic001G234700 Sobic001G234700 Sobic009G258200--Sobic001G234700 Sobic010G010100--Sobic005G059300 Sobic010G010100--Sobic010G091750 Sobic010G010100--Sobic009G142600 Sobic002G103400 Sobic002G103400 Sobic010G010100--Sobic002G103400 Sobic005G144101 Sobic005G144101 Sobic010G010100--Sobic005G144101 Sobic007G087500 Sobic007G087500 Sobic010G010100--Sobic007G087500 Sobic010G273200 Sobic010G273200 Sobic010G010100--Sobic010G273200 Sobic008G053700 Sobic008G053700 Sobic010G010100--Sobic008G053700 Sobic006G004700 Sobic006G004700 Sobic010G010100--Sobic006G004700 Sobic005G205000--Sobic008G045900 Sobic005G205000--Sobic009G142600 Sobic005G205000--Sobic009G258200 Sobic002G063500 Sobic002G063500 Sobic005G205000--Sobic002G063500 Sobic004G090900 Sobic004G090900 Sobic005G205000--Sobic004G090900 Sobic006G258200 Sobic006G258200 Sobic005G205000--Sobic006G258200 Sobic005G014600 Sobic005G014600 Sobic005G205000--Sobic005G014600 Sobic001G045300 Sobic001G045300 Sobic005G205000--Sobic001G045300 Sobic002G084100 Sobic002G084100 Sobic005G205000--Sobic002G084100
Octagon: transcription factors


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