Gene annotation
Transcriptome id Sobic.006G123600.7,Sobic.006G123600.5,Sobic.006G123600.4,Sobic.006G123600.6
Synonym Sb06g020390, SRT1
Functional annotation transcriptional regulator Sir2 family protein, putative, expressed
UniProt A0A1B6PLP2 , A0A1Z5RDH9
Pfam PF02146
Panther DB PTHR11085 PTHR11085:SF20
NCBI CDD KOG1905; Class IV sirtuins (SIR2 family)
KEGG Orthology K11416; SIRT6, NAD+-dependent protein deacetylase sirtuin 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55760 : sirtuin 1
RAP-DB (Rice) LOC_Os04g20270.1 : transcriptional regulator Sir2 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056316
Brachypodium KQJ81768 , KQJ81769 , KQJ81764 , PNT60650 , KQJ81766 , KQJ81767 , KQJ81765
Barley HORVU2Hr1G012930.9 , HORVU2Hr1G012930.8 , HORVU2Hr1G012930.3 , HORVU2Hr1G012930.2 , HORVU2Hr1G012930.1 , HORVU2Hr1G012930.7 , HORVU2Hr1G012930.6 , HORVU2Hr1G012930.5 , HORVU2Hr1G012930.4 , HORVU2Hr1G012930.18 , HORVU2Hr1G012930.13 , HORVU2Hr1G012930.12 , HORVU2Hr1G012930.11 , HORVU2Hr1G012930.10 , HORVU2Hr1G012930.17 , HORVU2Hr1G012930.16 , HORVU2Hr1G012930.15 , HORVU2Hr1G012930.14
Wheat TraesCS2D02G075800 , TraesCS2D02G075800 , TraesCS2A02G077800 , TraesCS2B02G092700 , TraesCS2B02G092700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G188900 expressed protein -
2 Sobic.009G205000 pentatricopeptide repeat protein PPR986-12, putative, expressed -
3 Sobic.004G078400 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
4 Sobic.001G421100 - -
5 Sobic.001G477350 - -
6 Sobic.001G175500 transcription factor X1, putative, expressed -
7 Sobic.006G155400 expressed protein -
8 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
9 Sobic.007G032200 - -
10 Sobic.004G037401 - -
11 Sobic.002G240300 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
12 Sobic.009G022600 - -
13 Sobic.002G132201 - -
14 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
15 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
16 Sobic.001G371650 - -
17 Sobic.005G150250 - -
18 Sobic.006G210600 expressed protein -
19 Sobic.010G103000 expressed protein -
20 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase


Gene co-expression network
sample Sobic006G123600 Sobic006G123600 Sobic003G188900 Sobic003G188900 Sobic006G123600--Sobic003G188900 Sobic009G205000 Sobic009G205000 Sobic006G123600--Sobic009G205000 Sobic004G078400 Sobic004G078400 Sobic006G123600--Sobic004G078400 Sobic001G421100 Sobic001G421100 Sobic006G123600--Sobic001G421100 Sobic001G477350 Sobic001G477350 Sobic006G123600--Sobic001G477350 Sobic001G175500 Sobic001G175500 Sobic006G123600--Sobic001G175500 Sobic006G155400 Sobic006G155400 Sobic006G123600--Sobic006G155400 Sobic002G240200 Sobic002G240200 Sobic006G123600--Sobic002G240200 Sobic007G032200 Sobic007G032200 Sobic006G123600--Sobic007G032200 Sobic010G103000 Sobic010G103000 Sobic003G188900--Sobic010G103000 Sobic003G188900--Sobic004G078400 Sobic001G112300 Sobic001G112300 Sobic003G188900--Sobic001G112300 Sobic002G213050 Sobic002G213050 Sobic003G188900--Sobic002G213050 Sobic004G089600 Sobic004G089600 Sobic003G188900--Sobic004G089600 Sobic007G069750 Sobic007G069750 Sobic003G188900--Sobic007G069750 Sobic003G188900--Sobic006G155400 Sobic007G202000 Sobic007G202000 Sobic003G188900--Sobic007G202000 Sobic003G188900--Sobic006G123600 Sobic005G024600 Sobic005G024600 Sobic009G205000--Sobic005G024600 Sobic009G205000--Sobic001G477350 Sobic009G205000--Sobic004G078400 Sobic007G172900 Sobic007G172900 Sobic009G205000--Sobic007G172900 Sobic009G205000--Sobic006G123600 Sobic009G205000--Sobic010G103000 Sobic010G046200 Sobic010G046200 Sobic009G205000--Sobic010G046200 Sobic002G358900 Sobic002G358900 Sobic009G205000--Sobic002G358900 Sobic009G066000 Sobic009G066000 Sobic009G205000--Sobic009G066000 Sobic004G078400--Sobic010G103000 Sobic010G129900 Sobic010G129900 Sobic004G078400--Sobic010G129900 Sobic004G078400--Sobic003G188900 Sobic004G078400--Sobic007G069750 Sobic005G199500 Sobic005G199500 Sobic004G078400--Sobic005G199500 Sobic004G078400--Sobic001G112300 Sobic004G078400--Sobic002G213050 Sobic001G221750 Sobic001G221750 Sobic004G078400--Sobic001G221750 Sobic004G055400 Sobic004G055400 Sobic004G078400--Sobic004G055400 Sobic001G421100--Sobic002G240200 Sobic002G054800 Sobic002G054800 Sobic001G421100--Sobic002G054800 Sobic001G071500 Sobic001G071500 Sobic001G421100--Sobic001G071500 Sobic005G073300 Sobic005G073300 Sobic001G421100--Sobic005G073300 Sobic008G030801 Sobic008G030801 Sobic001G421100--Sobic008G030801 Sobic010G215201 Sobic010G215201 Sobic001G421100--Sobic010G215201 Sobic002G132201 Sobic002G132201 Sobic001G421100--Sobic002G132201 Sobic003G253650 Sobic003G253650 Sobic001G421100--Sobic003G253650 Sobic001G371650 Sobic001G371650 Sobic001G421100--Sobic001G371650 Sobic001G477350--Sobic001G112300 Sobic010G262950 Sobic010G262950 Sobic001G477350--Sobic010G262950 Sobic001G477350--Sobic009G066000 Sobic001G477350--Sobic009G205000 Sobic001G477350--Sobic007G069750 Sobic007G139950 Sobic007G139950 Sobic001G477350--Sobic007G139950 Sobic007G220066 Sobic007G220066 Sobic001G477350--Sobic007G220066 Sobic002G105501 Sobic002G105501 Sobic001G477350--Sobic002G105501 Sobic001G477350--Sobic002G213050 Sobic001G175500--Sobic003G188900 Sobic001G175500--Sobic006G123600 Sobic001G175500--Sobic004G078400 Sobic001G175500--Sobic010G103000 Sobic010G119800 Sobic010G119800 Sobic001G175500--Sobic010G119800 Sobic004G221000 Sobic004G221000 Sobic001G175500--Sobic004G221000 Sobic001G175500--Sobic007G202000 Sobic003G292500 Sobic003G292500 Sobic001G175500--Sobic003G292500 Sobic003G379400 Sobic003G379400 Sobic001G175500--Sobic003G379400 Sobic005G150250 Sobic005G150250 Sobic006G155400--Sobic005G150250 Sobic003G149700 Sobic003G149700 Sobic006G155400--Sobic003G149700 Sobic009G022600 Sobic009G022600 Sobic006G155400--Sobic009G022600 Sobic006G155400--Sobic002G132201 Sobic006G222200 Sobic006G222200 Sobic006G155400--Sobic006G222200 Sobic003G356500 Sobic003G356500 Sobic006G155400--Sobic003G356500 Sobic003G193900 Sobic003G193900 Sobic006G155400--Sobic003G193900 Sobic006G210600 Sobic006G210600 Sobic006G155400--Sobic006G210600 Sobic006G155400--Sobic005G073300 Sobic002G240200--Sobic002G054800 Sobic002G240200--Sobic001G071500 Sobic002G240200--Sobic005G073300 Sobic002G240200--Sobic010G215201 Sobic002G240200--Sobic002G132201 Sobic002G240200--Sobic001G421100 Sobic002G240200--Sobic001G371650 Sobic002G240200--Sobic008G030801 Sobic002G240200--Sobic003G149700 Sobic007G032200--Sobic001G371650 Sobic007G032200--Sobic002G132201 Sobic007G032200--Sobic002G054800 Sobic007G032200--Sobic002G240200 Sobic004G282200 Sobic004G282200 Sobic007G032200--Sobic004G282200 Sobic007G032200--Sobic005G073300 Sobic003G048900 Sobic003G048900 Sobic007G032200--Sobic003G048900 Sobic007G032200--Sobic001G071500 Sobic007G032200--Sobic009G022600
Octagon: transcription factors


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